Gene Lcho_2937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2937 
Symbol 
ID6160115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3239528 
End bp3240043 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content72% 
IMG OID641665716 
ProductNusB antitermination factor 
Protein accessionYP_001791967 
Protein GI171059618 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGCTC CCCTGTCCAA GCCGGCGCCC GGCGGCAAGC CGCGCGGCAA CGCCACGCCC 
GCCGGCGCGC CGCGCCCGAA GTCGGCCCGC CGACGTTCGC GTGAGCTGGC GCTGCAAGGC 
CTCTACGAAT GGCAGGTCGG CCAGGCCGAC TCGCACGTCG TCGAGGCCCA CATGCGCGAG 
CAGGAAGACC ACGCCAAGTG CGACACGGCG CATTTCTCGG CGCTGCTGCA CGGCTGCATC 
GCCCAGGTGG CGGCGCTCGA CGCGGTGCTG ACGCCGCACC TCGACCGCCG CGTGCAGGAG 
CTGTCGCCGG TCGAACACGG CGTGCTGCTG ATCGGCGCCT ACGAGCTGCA GCACTGCCTC 
GACGTGCCGT ACAAGGTGGC GATCAACGAG GCGGTCGAAC TGGCCAAGTC GTTCGGCGGC 
ACCGACGGGC ACAAGTACGT CAACGGCGTG CTCGACAAGG CCGCCGCCGA CCTGCGCCCC 
GCCGAAGTGG CCGCCCAGCG CAACCGCCGC ACCTGA
 
Protein sequence
MNAPLSKPAP GGKPRGNATP AGAPRPKSAR RRSRELALQG LYEWQVGQAD SHVVEAHMRE 
QEDHAKCDTA HFSALLHGCI AQVAALDAVL TPHLDRRVQE LSPVEHGVLL IGAYELQHCL 
DVPYKVAINE AVELAKSFGG TDGHKYVNGV LDKAAADLRP AEVAAQRNRR T