Gene Lcho_2928 details

Gene Information

• Locus tag: Lcho_2928
• Symbol: nrdR
• ID: 6160030
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 3231825
• End bp: 3232268
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 641665707
• Product: transcriptional regulator NrdR
• Protein accession: YP_001791958
• Protein GI: 171059609
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCGCTGCC CCTACTGCGG AAACGTTGAA ACCACCGTCG TCGAGACCCG CGAGTCCGAC 
GAGGGTGACG CCGTGCGTCG GCGCCGGCGC TGCAGCGCCT GCGACAAACG CTTCACCACC 
TACGAACGCG CCGAACTGGC GATGCCGGCG GTGGTCAAGA AGAACGGCGA CCGGCGCGAG 
TTCGACCGCG AGAAGCTGCG CGCCTCGATG ACGTTGGCGC TGCGCAAGCG CAATGTCAGC 
GTCGACCTGA TCGATGCCGC GATCGCCCGC ATCGAGGACA AGGTCTTCAC CAGCGGCGCC 
AGCGAAATGA GCACCTCGCG CATCGGCGAG ATGGTGATGC GCGAACTCAA GCGCCTCGAC 
AAGGTGGCCT ACGTGCGCTT CGCCTCGGTC TACCGCGAGT TCGAGGACAT CGACGCCTTC 
AGCAAGCTGA TCCAGGAAAT CTGA 

 

Protein sequence

MRCPYCGNVE TTVVETRESD EGDAVRRRRR CSACDKRFTT YERAELAMPA VVKKNGDRRE 
FDREKLRASM TLALRKRNVS VDLIDAAIAR IEDKVFTSGA SEMSTSRIGE MVMRELKRLD 
KVAYVRFASV YREFEDIDAF SKLIQEI