| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2899 |
|---|
| Symbol | |
|---|
| ID | 6160080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3192371 |
|---|
| End bp | 3192709 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641665678 |
|---|
| Product | nitrogen regulatory protein P-II |
|---|
| Protein accession | YP_001791929 |
|---|
| Protein GI | 171059580 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0347] Nitrogen regulatory protein PII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0172484 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA TCACCGCGGT CATCAAGCCC TTCAAACTGG AAGAAGTGCG TGAGGCGCTG
GCCGATGTCG GCGTCACCGG GCTCACCGTC ACCGAGGTGA AGGGTTTCGG CCGTCAGAAG
GGCCACACCG AGCTGTATCG GGGTGCGGAA TACGTGGTCG ACTTCCTGCC CAAGGTGAAG
ATCGAGGTGG TGGTCAAGAC CGCCGACGTC GATCGCTGCC TGGAGGCGAT CGTCAAGGCC
GCCAAGACCG GCAAGATCGG CGATGGCAAG ATCTTCGTGA CGGCGGTCGA GCAGGTGGTG
CGCATCCGCA CCGGCGAGAC CGACGAACAG GCCATCTGA
|
|---|
| Protein sequence | MKQITAVIKP FKLEEVREAL ADVGVTGLTV TEVKGFGRQK GHTELYRGAE YVVDFLPKVK
IEVVVKTADV DRCLEAIVKA AKTGKIGDGK IFVTAVEQVV RIRTGETDEQ AI
|
|---|
| |