| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2887 |
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| Symbol | |
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| ID | 6160158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3179917 |
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| End bp | 3180888 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641665666 |
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| Product | peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 |
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| Protein accession | YP_001791917 |
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| Protein GI | 171059568 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.103148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGG AGCGCGTGGG GAAGAAACGC GTCAAGGCCG CCAAGATCGT CAAGATCGCC
AAGGCGTCCA AGTCGGCGAA GGTCATTCCG CGGCGCAGTG TCGTGCGTGC ACGTGCCATC
GTGGACGCCC CGGTCAGGGC GTCTTTCGGA CAGGGTTTCG GCTTGCACCT GACCGAGGAT
GCGCTCGACC TGAAATCCAG CGTCGCGTTC GTGATCGATC AGGAAACCTC CGAAGTCCTG
TTCAGCAAGA ACCCGCAGGC CGTCCTGCCC ATCGCATCGC TGACCAAGTT GATGACGGCC
CTGGTGGTCG TCGAGGCCGG TCAGCCGCTG GACGAGATCC TCGAAGTCAG CGAGGCCGAC
GTCGACACTG AAAAATTCAG TCGATCGCGC TTGGCCGTGG GGACCCGTCT GACCCGTGAA
GACATGCTGC ACCTGGCATT GATGTCATCC GAGAACCGTG CCGCCCACGC GCTCGGACGG
CATTTTCCGG GTGGCCTCAA TGCGTTTGTC GACGCGATGA ACTTCAAGGC CGCTTCGCTG
GGCATGGCCG ATACGCACTA CGTCGAGCCG ACCGGCCTGT CGAGTCGCAA CCAGGCCAGC
GCGCCTGATC TGGCACGTCT CGTCAAGGCT GCCTACGCCT ACCCGCTGCT TCGTGATTTC
TCGACCACGC CCGAGGCCGA GGTCGAAGTC GGGCGGCGCA CGATGCAGTT CCGCAACACC
AATGGCCTGA TCCGCAATCC GACCTGGGAC ATCGGGCTGC AGAAAACCGG CTACATCGTC
GAAGCCGGTC GTTGCCTGGT CATGCAGGCG AAGTTTGCCG GTCGCCAGCT GATCATGGTG
TTCCTGGATT CAACCGGCAA GTACTCGCGT CTTGGCGATG CCGAGCGGGT GCGCCGCTGG
CTCGAGAGCG ACACCGGGAT CGCCACCGCT GCACACCCGA CTGCCAGCCC CCGTGTGCGC
ACCGCGCATT GA
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| Protein sequence | MAAERVGKKR VKAAKIVKIA KASKSAKVIP RRSVVRARAI VDAPVRASFG QGFGLHLTED
ALDLKSSVAF VIDQETSEVL FSKNPQAVLP IASLTKLMTA LVVVEAGQPL DEILEVSEAD
VDTEKFSRSR LAVGTRLTRE DMLHLALMSS ENRAAHALGR HFPGGLNAFV DAMNFKAASL
GMADTHYVEP TGLSSRNQAS APDLARLVKA AYAYPLLRDF STTPEAEVEV GRRTMQFRNT
NGLIRNPTWD IGLQKTGYIV EAGRCLVMQA KFAGRQLIMV FLDSTGKYSR LGDAERVRRW
LESDTGIATA AHPTASPRVR TAH
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