Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2881 |
Symbol | |
ID | 6159854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3171493 |
End bp | 3172920 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641665660 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001791911 |
Protein GI | 171059562 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.384259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAC AATTCGACGT CGTCGTGATC GGCGGCGGCC CCGGTGGCTA CATCGCTGCC ATCCGTGCAG CGCAGCTGGG TTTCAACGTC GCCTGCATCG ACGAGTGGAA GAACGACAAG GGCGGCCCCG CTCCCGGCGG CACCTGCACC AACGTCGGCT GCATCCCGTC GAAGGCGCTG CTGCAGTCGT CCGAGCACTA CGAACAGGCC GCCCACCACT TCGGTGACCA CGGCATCACG CTCGACAACC TGAAGATGGA TGTCGCCAAG ATGGTGGGCC GCAAGGACAC CGTCGTGAAG CAGAACAACG ACGGCATCCT GTATCTCTTC AAGAAGAACA AGATCAGCTT CTTCCACGGC CGCGGCTCGT TCGCCAAGGC GGTCGAGGGC GGCTACGAGA TCAACGTCGC CGGCGCCGCC GCCGAGACGC TGGTGGGCAA GCAGATCATC ATCGCCACCG GCTCCAATGC CCGTGCGCTG CCGGGTGCCG CGTTCGACGA AGACAAGGTG CTGTCCAACG ACGGCGCGCT GCGCATCGGC GCGGTGCCGG CCAAGCTGGG CGTGATCGGC TCGGGCGTGA TCGGCCTGGA AATGGGCTCG GTCTGGCGTC GCCTGGGCGC TGAAGTGACC ATTCTCGAAG CGCTGCCCAA CTTCCTCGGC GCCGCCGACG AAGGCGTGGC CAAGGAAGCG CTCAAGGCGT TCAAGAAGCA GGGCCTGAAG TTCGAGTTCG GCGTCAAGAT CTCGGCCGTC GACACCAGTG GTGCCGGCGT CACCGTGGCC TACACCGATG ACAAGGGCGC CGAGCAGACG CTGGCGGTCG ACAAGCTGAT CGTCTCGATC GGCCGGGTCG CCAACACCAT CGGCCTGAAC CCCGAAGCGG TCGGCCTGGC GCTTGACGAG CGCGGCGCGA TCGTGGTCGA CGGCGACTGC AAGACCAACC TGCCGGGCGT GTGGGCGGTC GGTGACGTGG TGCGTGGCCC GATGCTCGCG CACAAGGCCG AGGAAGAAGG CGTGGCGGTG GCCGAGCGCA TCGCCGGCCA GCACGGCCAT GTGAACTTCG CGACCATCCC GTGGGTGATC TACACCTCGC CCGAGATCGC CTGGGTCGGC CGCACCGAGC AGCAGCTCAA GGCCGACGGC GTGGCGTACA AGGCGGGCCA GTTCCCCTTC GTCGCCAACG GTCGCGCGCG TGCGCTGGGT GACACCACGG GCTTCGTCAA GTTCCTGGCC GATGCCACGA CCGACGAGAT CCTGGGCGTG CACATCGTCG GTCCGTTCGC TTCCGAACTG ATCTCCGAGG CCGTCGTGGC GATGGAGTTC AAGGCCTCGG CCGAGGACAT CGCGCGCATC TGCCACGCGC ACCCGTCGCT GTCGGAGGCG ACCAAGGAAG CCGCGCTGGC CGTCGACAAG CGCACGCTCA ACTTCTGA
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Protein sequence | MSKQFDVVVI GGGPGGYIAA IRAAQLGFNV ACIDEWKNDK GGPAPGGTCT NVGCIPSKAL LQSSEHYEQA AHHFGDHGIT LDNLKMDVAK MVGRKDTVVK QNNDGILYLF KKNKISFFHG RGSFAKAVEG GYEINVAGAA AETLVGKQII IATGSNARAL PGAAFDEDKV LSNDGALRIG AVPAKLGVIG SGVIGLEMGS VWRRLGAEVT ILEALPNFLG AADEGVAKEA LKAFKKQGLK FEFGVKISAV DTSGAGVTVA YTDDKGAEQT LAVDKLIVSI GRVANTIGLN PEAVGLALDE RGAIVVDGDC KTNLPGVWAV GDVVRGPMLA HKAEEEGVAV AERIAGQHGH VNFATIPWVI YTSPEIAWVG RTEQQLKADG VAYKAGQFPF VANGRARALG DTTGFVKFLA DATTDEILGV HIVGPFASEL ISEAVVAMEF KASAEDIARI CHAHPSLSEA TKEAALAVDK RTLNF
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