| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2861 |
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| Symbol | |
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| ID | 6159962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3149506 |
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| End bp | 3150687 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665640 |
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| Product | HflK protein |
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| Protein accession | YP_001791891 |
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| Protein GI | 171059542 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA ATGGCCGCAA CGATGGGCCG CCCGATCTCG ACGAGTTGTG GCGTGATTTC
AACCAGAAGC TCGGCGGCCT GTTTGGCGGT CGCAACGGTG GTCCGCGTGG CGGCCGTGGC
AATCCGGGTG GCTCAGGAAG TGAGCCGCCG GATGCCCGCG TGATGGGCAT CGGTGGTGGG
CTGATCGCCG GCGTCGTCGC GTTGCTGTGG TTCGGCAGCG GCTTCTTCAT CGTCCAGGAA
GGCCAGCAAG CCGTGGTGCT GACCTTCGGC AAGTTCACGC GCACGGTCGA TGCCGGCATC
CAGTTCCGCT GGCCTTATCC GTTCCAGTCG CACGACACCG TGTCGGTGAC GCAGACCCGC
TCGACCGAGG TGGGGCGCAG CAATGTCGTG CAGGCCACCG GCTTGCGTGA TTCGTCGATG
CTCACGCAGG ACGAGAACAT CGTCGACATC CGGTTCACGG TGCAATGGCG CCTGAAGGAT
GCCAAGGACT TCCTGTTCGA GAATCGCAAT GTCGACGAGG CCGTCCTGCA GGCGGCCGAA
TCGGCGGTAC GCGAGATCGT CGGGCGCAGC AACATGGATT CGGTGCTCTA CGAGCAGCGT
GACGCGATCG CGGTCGATCT GGTCAAGTCG ATCCAGACCC AGCTCGATCG CCTGAAGGCG
GGCATCCTGG TCGTCAATGT CAACGTTCAG AGCGTTCAGG CGCCCGAGCA GGTACAGGCC
GCGTTCGATG ACGCCTTCAA GGCCGGTGCC GATCGCGAGC GCCTGAAGAA CGAAGGCCAG
GCCTATGCCA ACGACATCCT GCCCAAGGCG CAGGGTGCTG CGGCGCGGCT GTCCGAAGAG
GCGCAGGGTT ATCGCGCGCG CGTGATCGCC CAGGCCGAAG GTGACGCCGA ACGTTTCCGC
TCCGTGCTGA CCGAGTACCA GAAGGCGCCG GCCGTGACGC GGGACCGCCT CTACATCGAC
ACCATGGCGC AGGTCTATTC GAACGTCAGC AAGGTGATGG TCGATTCACG CAATGGCAGC
AATCTGCTTT ATCTGCCGCT GGACAAGCTG ATCCAGCAGG CCGCGTCCGG TCCGGCACCC
GCGGCCGGGC CCGTGATTCC CTCGCCTGAA TCCATGCAGG GTGCGGTCAC GGATGTGCGT
TCGCGCGATG GCCAGCGCAG CCGCGACCGT GACGGTCGTT GA
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| Protein sequence | MASNGRNDGP PDLDELWRDF NQKLGGLFGG RNGGPRGGRG NPGGSGSEPP DARVMGIGGG
LIAGVVALLW FGSGFFIVQE GQQAVVLTFG KFTRTVDAGI QFRWPYPFQS HDTVSVTQTR
STEVGRSNVV QATGLRDSSM LTQDENIVDI RFTVQWRLKD AKDFLFENRN VDEAVLQAAE
SAVREIVGRS NMDSVLYEQR DAIAVDLVKS IQTQLDRLKA GILVVNVNVQ SVQAPEQVQA
AFDDAFKAGA DRERLKNEGQ AYANDILPKA QGAAARLSEE AQGYRARVIA QAEGDAERFR
SVLTEYQKAP AVTRDRLYID TMAQVYSNVS KVMVDSRNGS NLLYLPLDKL IQQAASGPAP
AAGPVIPSPE SMQGAVTDVR SRDGQRSRDR DGR
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