| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2850 |
|---|
| Symbol | |
|---|
| ID | 6162602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3136874 |
|---|
| End bp | 3137620 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641665628 |
|---|
| Product | ribosomal protein S2 |
|---|
| Protein accession | YP_001791880 |
|---|
| Protein GI | 171059531 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.274359 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTCA CGATGCGCGA AATGCTGGAA GCCGGTGTCC ACTTCGGTCA CCAAACCCGC
TTCTGGAACC CCAAGATGGC CCCGTATATC TTCGGCCATC GCAACAAGAT CCACATCATC
AACCTCGAGA AGACGGTTCC GCTCTTCAAC GAGGCGACCA AGTACGCACG CCAGCTCGCA
GGCAAGCGCG GCACCATCCT GTTCGTCGGC ACCAAGCGCC AGGCGCGTGA CGTCGTGGCG
ATGGAAGCCG CACGCGCGGG CATGCCGTTC GTCGAGACCC GCTGGCTCGG CGGCATGCTG
ACCAACTTCA AGACCGTCAA GGGTTCGCTG AAGAAGCTCA AGGAAATGCA GGCCCAGGTC
GAGGCCGGCA CCCAGCCCGC GATCAAGAAG GAAGCGCTGA TGTTCCAGCG CGAGATCGCC
AAGCTCGAGA AGGACATCGG CGGCATCCAG GACATGAACG CGCTGCCTGA CGCGCTGTTC
GTGATCGACG TCGGTTTCCA CAAGATCGCG ATCGCCGAAG CCAAGAAGCT CGGCATCCCC
GTGATCGGCG TGGTCGACAC CAACCACTCG CCGGTCGGCA TCGACTACGT CATCCCCGGC
AACGACGACT CGGCCAAGGC GGTTGCGCTG TACGCCCGTG TCATGGCCGA CGCGATCATC
GAAGGCAAGG CCAACTCGCT CAATGAAGTG GTCGAGGCTG CCGCCGGCGC CAGCGACGAG
TTCGTCGAGG TCAGCGACCC CGCCTGA
|
|---|
| Protein sequence | MSFTMREMLE AGVHFGHQTR FWNPKMAPYI FGHRNKIHII NLEKTVPLFN EATKYARQLA
GKRGTILFVG TKRQARDVVA MEAARAGMPF VETRWLGGML TNFKTVKGSL KKLKEMQAQV
EAGTQPAIKK EALMFQREIA KLEKDIGGIQ DMNALPDALF VIDVGFHKIA IAEAKKLGIP
VIGVVDTNHS PVGIDYVIPG NDDSAKAVAL YARVMADAII EGKANSLNEV VEAAAGASDE
FVEVSDPA
|
|---|
| |