Gene Lcho_2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2847 
Symbolfrr 
ID6162664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3134452 
End bp3135012 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content63% 
IMG OID641665625 
Productribosome recycling factor 
Protein accessionYP_001791877 
Protein GI171059528 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG CCGAGATCAA GAAGAACGCT GAAGCCAAGA TGGCCAAGTC GGTGGAAGCG 
TTCAAGAACG AACTGCAGAA GATCCGCACC GGCCGGGCCC ATCCGGGCAT CCTGGACCAG 
GTGCATGTCG ACTACTACGG CTCGAACCTG CCGCTCAGCC AGGTGGCGAA CGTCACGCTG 
ATCGATGCGC GCACCATCAG CGTCCAGCCG TGGGAAAAGA GCATGGCGCA GAAGATCGAG 
AAGGCGATCC GCGAATCCGA TCTCGGCCTG AACCCGTCGA GCATGGGCGA CCTGATCCGC 
GTGCCGATGC CGGCCCTGAC CGAAGAGCGC CGCAAGGAAC TCACCAAGGT CGTGCGCCAT 
GCCGGCGAGG ACTCCAAGGT GGCGGTGCGC AACCTGCGCC GCGATGCCAA CGACCAGGCC 
AAGAAGCTGC TCAAGGACAA GCTGATCTCC GAGGACGACG AGCGCCGCTC GGTCGACGAG 
GTGCAGAAGC TGACCGACCG CGTGATCGCC GAGATCGACC GGCTGGTGCA TGGCAAGGAA 
GCCGAAATCC TGGCCGTCTG A
 
Protein sequence
MSIAEIKKNA EAKMAKSVEA FKNELQKIRT GRAHPGILDQ VHVDYYGSNL PLSQVANVTL 
IDARTISVQP WEKSMAQKIE KAIRESDLGL NPSSMGDLIR VPMPALTEER RKELTKVVRH 
AGEDSKVAVR NLRRDANDQA KKLLKDKLIS EDDERRSVDE VQKLTDRVIA EIDRLVHGKE 
AEILAV