Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2844 |
Symbol | |
ID | 6162661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3131606 |
End bp | 3132814 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641665622 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_001791874 |
Protein GI | 171059525 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCG ATCACAAGCC CGCCGCGCGG CAACGCGTCT GCATCCTCGG CTCCACCGGC TCGATCGGCA CCAGCACGCT CGACGTGCTG TCGCGCCATC CCGACCGCTT CGAGGTGGTC GCGCTGACCG CCCACAGCCG GGTCGACGAA CTGGCCGCGC AGTGCCTGCA ATGGCGCCCG CGCTGGGCCG TGATGGCGAC CGCCGCGCAG GCTCTCGATC TCTCGCAGCG CCTGCGTGCA GCCGGCTTGG GCACCGAGGT GCTGCACGGT GCCGACGCGC TGGTGCAGGT GGCCGGTCAC GACCAGGTCG ACACCGTGAT GGCCGCCATC GTCGGTGCCG CCGGCCTGGC GCCGTGCCTG GCCGCGGCGC GTGCCGGCAA GCGCCTGCTG CTGGCCAACA AGGAGGCCAT CGTGGTCGGC GGCGCCCTGT TCATGCAGGC GGTGCGCGAG GGCGGTGCCA CGCTGCTGCC GATCGACAGC GAACATTCGG CGATCTTCCA GTGCCTGCCC GAAGACCGTC GTACCTGGCC GCAGCGCATC GACCACATCG TGCTGACCGC CTCGGGCGGA CCGTTCCGCA GCCGTGATCC GGCGACGCTG GCCGAGGTCA CGCCCGAACA GGCATGCGCT CACCCGAACT GGGTGATGGG CCGCAAGATC TCGGTCGATT CGGCCACGAT GATGAACAAG GCGCTCGAGG TCATCGAGGC GCGCTGGCTG TTCGACCTGA CGCCGCGGCA GGTGCGGGTG GTGATCCATC CGCAGAGCAT CATCCACTCG ATGGTGGTGT GCCGCGACGC CTCGGTGCTG GCGCAACTGG GCACGCCCGA CATGCGGGTG CCGATCGCCT ACGGCCTGGC CTGGCCCGAG CGCATCGAGT CGGGCGCGTC GCAGCTCGAT TTCCTCGGCC TTGCCAACCT GACCTTCGAG CCGGCCGACG CGCAGCGTTA TCCCGGCCTG CAACTGGCCT GGCAGGCGCT CGAATCGCGT GAAGGCAGCA CCACGGTGCT CAACGCTGCC AACGAGATCG CGGTGGATGC CTTCCTGAAC CGCCGGTTGC GCTTCGACCA GATCGCCCGC CTGAATGCGA CCGTGCTCGA GCGCCTGGCC GTCCCGGCCG ACGCGGCTGC ATCGGTCGAG GGTCTGCTGG CGCTCGACGG GCGTGCCCGG TCGCTCGCGG GCGAACTGAT CCGCACCGGA AGAATCTGA
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Protein sequence | MNLDHKPAAR QRVCILGSTG SIGTSTLDVL SRHPDRFEVV ALTAHSRVDE LAAQCLQWRP RWAVMATAAQ ALDLSQRLRA AGLGTEVLHG ADALVQVAGH DQVDTVMAAI VGAAGLAPCL AAARAGKRLL LANKEAIVVG GALFMQAVRE GGATLLPIDS EHSAIFQCLP EDRRTWPQRI DHIVLTASGG PFRSRDPATL AEVTPEQACA HPNWVMGRKI SVDSATMMNK ALEVIEARWL FDLTPRQVRV VIHPQSIIHS MVVCRDASVL AQLGTPDMRV PIAYGLAWPE RIESGASQLD FLGLANLTFE PADAQRYPGL QLAWQALESR EGSTTVLNAA NEIAVDAFLN RRLRFDQIAR LNATVLERLA VPADAAASVE GLLALDGRAR SLAGELIRTG RI
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