Gene Lcho_2840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2840 
Symbol 
ID6163108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3126184 
End bp3127212 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content69% 
IMG OID641665618 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 
Protein accessionYP_001791870 
Protein GI171059521 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCG CTCTGCATGA ACTGCATGCG GCGTTGGGCG GTGAGTTGCT GGGGGATCCG 
TCGCTTGTGA TCCGCCGCAT CGGCCCGCTC GCCAGCGCCG ACGCCGAGAC CATCAGCTTC 
GTCTCCAACG CGCGTTATCG CGCCCAGCTG GCGCAGACCG CCGCGGCCTG CGTGATCGTC 
GCACCCGCGC TGGCCGAAGA CGCCGCCCAG CGCGGCGCGG CCATCGTCAC GCCCGATCCT 
TACCACTACT TCGCCCGCCT GACGCAATGG TGGGCGGCGC GGTTGCGTGT CGCGCCGCCA 
TCGGGTGTGC ACCCGTCCGC GGTGGTGGCG GCCGATGTGC GCCTGGGTGA GGGCGTCTCG 
GTCGGCCCGC TCACGGTGAT CGAGGCCGGT GCGGTACTGG GTGACGGCGT GGTGATCGCG 
AGCCAGTGCC ACATCGGTGC GGGCGTGCAG ATCGGCGCAC AGACCCGGCT GGCGCCGCAC 
GTCACGCTGA TGCCCGGCAC GCGGCTGGGC CAGCGCTGCC TGCTGCACGG CGGGGTCGTC 
ATCGGCGCCG ACGGATTCGG CTTCGCGCCG CACCAGGGCC GCTGGGAAAA GATCGAGCAG 
CTCGGCGGCG TGGTGGTGGG CGACGACGTC GAGATCGGCG CCAACACCTG CATCGATCGT 
GGCGCGCTCG ACGACACCGT GATCGGCGAG GGCGTCAAGC TCGACAACCT GATCCAGATC 
GGCCACAACG TGCAGATCGG CGCACACAGC GCGATGGCCG GCTGTGCCGG CGTGGCCGGC 
AGCGCGCGCA TCGGCCGCGG TTGTACCGTC GGCGGCGGCG CCATCGTTCT GGGCCACCTC 
GAACTGGCCG ACGGCGTGCA CATCTCGGCG GCCAGTGTCG TGATGCGCTC GATCAAGCAG 
CCCGGCCAAT ACAGCGGCGT GTTCCCGATC GACGACAACG CGTCTTGGGA AAAGAACGCC 
GCCACCCTGC GTCAATTGCA TACCTTGCGC GACCGTTTGC GCACCCTTGA AAAGAAGAGT 
TCCCCATGA
 
Protein sequence
MQAALHELHA ALGGELLGDP SLVIRRIGPL ASADAETISF VSNARYRAQL AQTAAACVIV 
APALAEDAAQ RGAAIVTPDP YHYFARLTQW WAARLRVAPP SGVHPSAVVA ADVRLGEGVS 
VGPLTVIEAG AVLGDGVVIA SQCHIGAGVQ IGAQTRLAPH VTLMPGTRLG QRCLLHGGVV 
IGADGFGFAP HQGRWEKIEQ LGGVVVGDDV EIGANTCIDR GALDDTVIGE GVKLDNLIQI 
GHNVQIGAHS AMAGCAGVAG SARIGRGCTV GGGAIVLGHL ELADGVHISA ASVVMRSIKQ 
PGQYSGVFPI DDNASWEKNA ATLRQLHTLR DRLRTLEKKS SP