Gene Lcho_2836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2836 
SymbolrnhB 
ID6163104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3123129 
End bp3123785 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content70% 
IMG OID641665614 
Productribonuclease HII 
Protein accessionYP_001791866 
Protein GI171059517 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCGC GCAAGTCCTC GGTCGCTGAG CCCTTGCGCG AGCAGCTGCC GCTGCACTTC 
GAGCGCGTCG GCCTGATGGC CGGTGTCGAC GAGGCCGGCC GCGGCCCGCT GGCCGGCCCG 
GTGGTGGCTG CGGCGGTGAT CCTCGACGAA CTGCAGCCGA TCGCCGGCCT GGCCGATTCC 
AAGATCCTGA CCGAGCGCCG CCGCGAGCGG CTGTTCGACG AGATCCGCGC CAAGGCGCTG 
GCCTTCTGCA TCGCGCAGGC CAGCGTCGAG GAGATCGACC GCCTGAACAT CCTGCAGGCG 
ACGATGCTGG CCATGAAACG TGCCGTCGAA GGCCTGCGCC TCAAGCCCGC GCAGGTGCTG 
GTCGACGGCA ACCGCGTGCC GGTGCTGCGC ATCCCGGCCG AGGCGATCGT CAAGGGCGAC 
GCCAAGGTGC CGGCGATCAG CGCGGCGTCG ATCCTGGCCA AGGTGCACCG TGACCGGCTC 
TGCCAGGCGC TGCACGAGCT TTATCCGCAC TACGGTTTTG CGGTCCACAA GGGTTACCCG 
ACCGCGGCGC ACCTGCAGGC GCTGAAGGAT CACGGGCCGT GCGAAAGCCA CCGCAAGTCC 
TATGCGCCGG TGCGCGAGGC GGGTCTGCAG CGGCTGACCC TCTCCAGCTC ATCCTGA
 
Protein sequence
MRSRKSSVAE PLREQLPLHF ERVGLMAGVD EAGRGPLAGP VVAAAVILDE LQPIAGLADS 
KILTERRRER LFDEIRAKAL AFCIAQASVE EIDRLNILQA TMLAMKRAVE GLRLKPAQVL 
VDGNRVPVLR IPAEAIVKGD AKVPAISAAS ILAKVHRDRL CQALHELYPH YGFAVHKGYP 
TAAHLQALKD HGPCESHRKS YAPVREAGLQ RLTLSSSS