Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2816 |
Symbol | |
ID | 6161657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3101795 |
End bp | 3102622 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641665594 |
Product | dihydropteroate synthase |
Protein accession | YP_001791846 |
Protein GI | 171059497 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTGGC AAACCAGCCG TTTCCAGATT GACCTGTCAC AACCTCGCGT GATGGGTATC GTCAATGCGA CGCCCGATTC GTTTTCAGAC GGTGGACGCA GCCCGAACCA GGCACTCGCT CATGCCGAGA TGTTGCTGCG CGAGGGTGCT GACATCCTGG ACATCGGTGG CGAATCCAGC CGTCCAGGCG CGCCTGCGGT ATCGGTCGAG GATGAGTTGG CTCGTGTGAT TCCGGTCTTG CGTGGGGCTC TGCAGATGGG GGTGCCGGTG TCGGTGGACA CATGGAAGCC GGAGGTCATG TGTGCCGCGC TCGACCTCGG CGTGGACATC GTCAACGACA TCCTTGCCCT GCAAGCCGAT GGTGCGCTCG AGGCCGTGGT TGCGCACCCG TCGTGCGGCA TCTGTCTCAT GCACATGCAG GGCGAACCCA GGTCGATGCA GCGCGATCCC AGGTACGACG ACGTGACGCG GTCGGTGCGC GACTTCCTGG CCGACCGCAG TCATGCCTTG CGTTCGCGCG GCGTGCAGGC CGCGCGCATC GTGCTCGATC CGGGCATCGG GTTCGGGAAG ACGGTCGAAC ACAACTTCGC ATTGATCAAG GGTCAGCGCG CCTTGCTGGA TCTGGGCTAC CCGGTGCTGG CGGGCTGGTC GCGCAAGTCG TCGATCGGCA CGGTCACCGG GCGTGCCGTC GGGGAGCGGG TTCATGGCAG CGTTGCCGCT GCGCTGGCTG CGGTTCAGTG TGGTGCCCGT GTGATTCGTG TGCACGATGT GGCAGCGACA GTCGACGCAC TGGCCGTGTG GCGTGCTGCC GGCTTGCCCG AGTGCTGA
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Protein sequence | MHWQTSRFQI DLSQPRVMGI VNATPDSFSD GGRSPNQALA HAEMLLREGA DILDIGGESS RPGAPAVSVE DELARVIPVL RGALQMGVPV SVDTWKPEVM CAALDLGVDI VNDILALQAD GALEAVVAHP SCGICLMHMQ GEPRSMQRDP RYDDVTRSVR DFLADRSHAL RSRGVQAARI VLDPGIGFGK TVEHNFALIK GQRALLDLGY PVLAGWSRKS SIGTVTGRAV GERVHGSVAA ALAAVQCGAR VIRVHDVAAT VDALAVWRAA GLPEC
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