Gene Lcho_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2816 
Symbol 
ID6161657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3101795 
End bp3102622 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content65% 
IMG OID641665594 
Productdihydropteroate synthase 
Protein accessionYP_001791846 
Protein GI171059497 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTGGC AAACCAGCCG TTTCCAGATT GACCTGTCAC AACCTCGCGT GATGGGTATC 
GTCAATGCGA CGCCCGATTC GTTTTCAGAC GGTGGACGCA GCCCGAACCA GGCACTCGCT
CATGCCGAGA TGTTGCTGCG CGAGGGTGCT GACATCCTGG ACATCGGTGG CGAATCCAGC
CGTCCAGGCG CGCCTGCGGT ATCGGTCGAG GATGAGTTGG CTCGTGTGAT TCCGGTCTTG
CGTGGGGCTC TGCAGATGGG GGTGCCGGTG TCGGTGGACA CATGGAAGCC GGAGGTCATG
TGTGCCGCGC TCGACCTCGG CGTGGACATC GTCAACGACA TCCTTGCCCT GCAAGCCGAT
GGTGCGCTCG AGGCCGTGGT TGCGCACCCG TCGTGCGGCA TCTGTCTCAT GCACATGCAG
GGCGAACCCA GGTCGATGCA GCGCGATCCC AGGTACGACG ACGTGACGCG GTCGGTGCGC
GACTTCCTGG CCGACCGCAG TCATGCCTTG CGTTCGCGCG GCGTGCAGGC CGCGCGCATC
GTGCTCGATC CGGGCATCGG GTTCGGGAAG ACGGTCGAAC ACAACTTCGC ATTGATCAAG
GGTCAGCGCG CCTTGCTGGA TCTGGGCTAC CCGGTGCTGG CGGGCTGGTC GCGCAAGTCG
TCGATCGGCA CGGTCACCGG GCGTGCCGTC GGGGAGCGGG TTCATGGCAG CGTTGCCGCT
GCGCTGGCTG CGGTTCAGTG TGGTGCCCGT GTGATTCGTG TGCACGATGT GGCAGCGACA
GTCGACGCAC TGGCCGTGTG GCGTGCTGCC GGCTTGCCCG AGTGCTGA
 
Protein sequence
MHWQTSRFQI DLSQPRVMGI VNATPDSFSD GGRSPNQALA HAEMLLREGA DILDIGGESS 
RPGAPAVSVE DELARVIPVL RGALQMGVPV SVDTWKPEVM CAALDLGVDI VNDILALQAD
GALEAVVAHP SCGICLMHMQ GEPRSMQRDP RYDDVTRSVR DFLADRSHAL RSRGVQAARI
VLDPGIGFGK TVEHNFALIK GQRALLDLGY PVLAGWSRKS SIGTVTGRAV GERVHGSVAA
ALAAVQCGAR VIRVHDVAAT VDALAVWRAA GLPEC