Gene Lcho_2786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2786 
Symbol 
ID6162250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3068937 
End bp3069671 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID641665563 
Productadenylylsulfate reductase, thioredoxin dependent 
Protein accessionYP_001791816 
Protein GI171059467 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02055] thioredoxin-dependent adenylylsulfate APS reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0000952252 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCGA TCGACCTGTA CGCCCGTCAC ACCGCCGGTT TCGAGGAGCG CCTGGCCGCC 
ACGCTGCAGA CCCTGCGTGA CGCCGCCGCG GCGCACCCGG GCCGCGTCGT GCAGTCGACC
AGCCTGGGCG CCGAGGACAT GGTCATCACC GACCTGATCG CCCGTCACCA GCTGCCGATC
GCGATCGGGA CGCTCGAGAC CGGCGCGCTG CATGCCGAGA CAGTGGCGCT GATCGGCCGC
ATCGAACAGC GTTACGGCGT GGCCGTGGAG GTCTACAAGC CGGTCGCCGA CGCGGTGATC
GAGTTCGTGC GCAAGAACGG CGACAAGGCG ATGTACGAAA GCCTCGCGCT GCGCAAGGGC
TGCTGCGGCA TCCGCAAGCT CGAACCGCTG GGCCGCATGC TGGCGCCGCG CACCGCGTGG
ATCACCGGCC TGCGCCGCGA GCAGAGCAAC AACCGCGGCG AGATGCAGCG CATCGAGGCC
GACGACGCCG GCCGCGCCAA GATCAACGCG CTGATCGACT GGAGCTGGAA CGACGTCTGG
CATTACATCC AGCAGAACGA CGTGCCCTAC AACCCGCTGC ACGACCAGTT CATGCCCAGC
ATCGGCTGCG CGCCCTGCAC CCGCGCCATC GGCGTGGGCG AGGACTTCCG CGCCGGCCGC
TGGTGGTGGG AAGACGAAGC GGCCAAGGAG TGCGGACTGC ACGTCCACCA GGTCGAGCCG
CTGCCGGCGC GCTGA
 
Protein sequence
MSAIDLYARH TAGFEERLAA TLQTLRDAAA AHPGRVVQST SLGAEDMVIT DLIARHQLPI 
AIGTLETGAL HAETVALIGR IEQRYGVAVE VYKPVADAVI EFVRKNGDKA MYESLALRKG
CCGIRKLEPL GRMLAPRTAW ITGLRREQSN NRGEMQRIEA DDAGRAKINA LIDWSWNDVW
HYIQQNDVPY NPLHDQFMPS IGCAPCTRAI GVGEDFRAGR WWWEDEAAKE CGLHVHQVEP
LPAR