Gene Lcho_2771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2771 
Symbol 
ID6163404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3054689 
End bp3056152 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content67% 
IMG OID641665548 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_001791801 
Protein GI171059452 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00538] oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0315162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACGA CGATCTCCGC AGGCACGCAG CCCCAATCCG CGACCACGAT CAACGCCGAC 
GTGGCCGCCA CGGACCACCA GCCGGTTCTG AGCGAGGAAC TGCTGCGCCG CATGGACGGC
CCCGGGCCAC GCTACACCTC CTACCCCACG GCGGATCGTT TCGTCGAGGC CTACACCGCC
GATCACTACC GCCAGGCACT GTCCCAGCGC AGCATCGGTG CGGTGGGCGG CGCAGGTGGG
CCGCTGTCGG TCTACGTGCA CGTGCCGTTC TGCGAATCGG TCTGCTATTA CTGCGCCTGC
AACAAGATCG TCACCCGCGA CCACGGCCGC TCGACCGCCT ACATCGACGC GCTGGCGCGC
GAGCTGGAAC TGGTCACGCA GACGCTCGGC CGGGGCCAGC GCGTCTCGCA ACTGCATTTC
GGCGGCGGCA CGCCCACCTT CCTGAGCGAT GCCGAACTCG ACCGCCTGAT GGGCGAGTTG
CGCCGGCATT TCCACATCGA GCCGCATGGC GAATATTCGA TCGAGATCGA CCCGCGCACC
GTCAGCCGCG AGCGCCTGGC TCACCTCAAG GAGCTCGGCT TCAACCGGGT CTCGTTCGGC
GTGCAGGATT TCGACGCCGA CGTGCAGAAG GCGGTGCACC GCGTCCAGCC TTTCGAGCAG
GTCGAGGCGC TGATGAAGGA TGCGCGCGAG CTCGGCTTCC ATTCGATCAA CGTCGACCTC
ATCTACGGCC TGCCCAAGCA GACGCCCGAG AGCTTCGCGC GCACCGTGCG CCAGGTCGCC
GGACTGCGGC CCGACCGCAT CGCGATGTAC GGCTACGCCC ACCTGCCGCA GCGCTTCAAG
CCGCAGCGTC GCATCGTCAC CGAAGAGCTG CCGCGTGGCA GCGACCGCAT CGGCATGCTG
TCGCAGGCCA TCAGCGGCTT CATCAGCCAC GGCTACCAGT ACATCGGCAT GGATCACTTC
GCGCTGCCCG AGGACGGCCT GGCGCAGGCC AAGCGGCAAG GGCGGCTGCA CCGCAACTTC
CAGGGCTACA GCACGCAGGC CGACTGCGAC CTGATCGCGC TGGGCGTGTC GGCCATCGGC
CGCATCGGCG CCACCTACAG CCAGAACGCC AAGACGCTCG ACGACTACTA CGACTCGCTC
AACCGCGGCG AGCTGCCGGT GGTGCGCGGC CTGGCCCTGA CGCGCGACGA CCTGGTGCGC
CGCGCCGTCA TCATGTCCAT CATGTGCCAC GGCCGGCTGA GCTACGAGTC GGTCGCCCTG
GCACACTTGA TCGACGTGAA AACCTACTTT GCCACCGAAC TCGAAGCCCT GGTCGACCTG
GCCGACCAAG GCCTGCTGAC GCTCGACCCG GATGGCTTCG AACTCACCCC GCTGGGCTGG
TACTTCGTGC GCTCGGTGGC GATGGTGTTC GATCGCCACC TGCGCGCCGA CCAGACCCGC
GAGCGCTTCT CGCGCGTGAT CTGA
 
Protein sequence
MHTTISAGTQ PQSATTINAD VAATDHQPVL SEELLRRMDG PGPRYTSYPT ADRFVEAYTA 
DHYRQALSQR SIGAVGGAGG PLSVYVHVPF CESVCYYCAC NKIVTRDHGR STAYIDALAR
ELELVTQTLG RGQRVSQLHF GGGTPTFLSD AELDRLMGEL RRHFHIEPHG EYSIEIDPRT
VSRERLAHLK ELGFNRVSFG VQDFDADVQK AVHRVQPFEQ VEALMKDARE LGFHSINVDL
IYGLPKQTPE SFARTVRQVA GLRPDRIAMY GYAHLPQRFK PQRRIVTEEL PRGSDRIGML
SQAISGFISH GYQYIGMDHF ALPEDGLAQA KRQGRLHRNF QGYSTQADCD LIALGVSAIG
RIGATYSQNA KTLDDYYDSL NRGELPVVRG LALTRDDLVR RAVIMSIMCH GRLSYESVAL
AHLIDVKTYF ATELEALVDL ADQGLLTLDP DGFELTPLGW YFVRSVAMVF DRHLRADQTR
ERFSRVI