Gene Lcho_2764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2764 
Symbol 
ID6163622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3045378 
End bp3046355 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content67% 
IMG OID641665541 
Productguanosine 5'-monophosphate oxidoreductase 
Protein accessionYP_001791794 
Protein GI171059445 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01306] guanosine monophosphate reductase, bacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.238599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCT TCGACTACGA CAACGTCCTG CTGCTGCCGC GCCAATGCCG CGTCGAAAGC 
CGCAGCGAAT GCGACCCCTC GGTCGAGTTC GGCCCGCGCC GCTTCAAGCT GCCGGTGGTG
CCGGCCAACA TGAAGACGGT GCTCGACGAG CGTATCGCCC GCTGGCTGGC CGCCAACGAC
TACTTCTACG TGATGCACCG CTTCGATCTC GACGCCCTGG CGTTCGCGCG TTCGATGCGC
GAGCAAGGGC TCTGCGTGTC GATCAGCTCG GGCGTCAAGC CGGCCGATTA CGCGGTGATC
GACAGCCTGG CCACCAGCGG CGTCGGTGCC GACTACATCA CCATCGACAT CGCCCACGGC
CATGCCGAGA GCGTGCGCCG GATGATCGCC CACATCAAGC AGCGCCTGCC CGAGGCCTTC
GTGATCGCCG GCAACGTCGG CACGCCCGAG GCGCTGATCG ACCTCGAGAA CTGGGGCGCC
GACGCCACCA AGGTCGGCAT CGGCCCGGGC AAGGTCTGCA TCACGCGGCT CAAGACCGGC
TTCGGCACCG GCGGCTGGCA GTTGAGCGCG CTGAAGTGGT GTGCCCGCGT GGCGACCAAA
CCCATCATTG CCGACGGCGG CATCCGCCAC CACGGCGACA TCGCCAAGAG CGTGCGTTTC
GGTGCCGCGA TGGTGATGGT GGGCTCGCTG TTCGCCGGCC ATGAAGAGTC GCCCGGCGAC
ACGGTCGAGG TCGACGGCCG GCTCTACAAG GAGTACTACG GCTCGGCCAG CGACTTCAAC
AAGGGCGAAT ACAAGCACGT CGAGGGCAAG CGCATCCTCG AGCCGGTCAA GGGCCGGCTG
GCCGACACGC TGCGCGAGAT GCGCGAGGAT CTGCAGAGCT CGATCAGCTA CGCCGGCGGT
CGCCAGCTGA GCGATCTGCG GCGCGTCAAC TACGTGATCC TGGGCGGCGA AAACGCCGGC
GAGCACCTGC TGATGTGA
 
Protein sequence
MEIFDYDNVL LLPRQCRVES RSECDPSVEF GPRRFKLPVV PANMKTVLDE RIARWLAAND 
YFYVMHRFDL DALAFARSMR EQGLCVSISS GVKPADYAVI DSLATSGVGA DYITIDIAHG
HAESVRRMIA HIKQRLPEAF VIAGNVGTPE ALIDLENWGA DATKVGIGPG KVCITRLKTG
FGTGGWQLSA LKWCARVATK PIIADGGIRH HGDIAKSVRF GAAMVMVGSL FAGHEESPGD
TVEVDGRLYK EYYGSASDFN KGEYKHVEGK RILEPVKGRL ADTLREMRED LQSSISYAGG
RQLSDLRRVN YVILGGENAG EHLLM