Gene Lcho_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2729 
Symbol 
ID6163467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3011452 
End bp3012234 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID641665506 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_001791759 
Protein GI171059410 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000014891 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCGCG CCCTGTGGAT TTCGAAGACC GGCATGGAAG CCCAGCAGAC CCAGCTGGAC 
GTGGTGTCGA ACAACCTCGC CAACGTTGCG ACCAACGGCT ACAAGAAGTC GCACGCCGTC
TTCGAGGACC TGATGTACCA GACGCTGCGC CAGAGCGGCG CGGCCAGTTC CGAGCAGACC
CAGCTGCCCA CCGGCCTGCA GGTCGGCCTG GGCGTGCGCA CGGTGGCGAC CTCGCGCCAG
TTCACGCAGG GCAACCTGCA GCAGTCGGGC AACACGCTCG ACGTGGCGAT CAAGGGCAAC
GGCTTCTTCC CGATCCAGAT GCCCGACGGC ACCACCGGCT ACACCCGCGA CGGCGCCTTC
CAGGTCAGCG CGACCGGCCA GCTCGTCACC AGCGCCGGCT ACGCGGTGCA GCCCGGCATC
ACGATCCCGG CCGACGCGCA GACCGTGACG ATCGCGCCCG ATGGCGTGGT GTCGGTGGCG
CTGCCGGGCC AGACCGCGCC GCAGGTGCTG GGCCAGTTGC AGGTGGCCAA CTTCATCAAC
CCGGCCGGCC TGGAGGCCAA GGGCGGCAAC CTCTACACCG AAACCGCCTC GTCGGGCACG
CCCAACGGCG GCGCGCCGGG CAGCAACGGG CTGGGCTCGC TGAGCCAGGG TTTCCTCGAA
ACCTCGAACG TCAACGTGGT CGAGGAACTC GTCACGATGA TCCAGACCCA GCGCGCCTAC
GAGCTCAACT CGAAGGCGAT CTCGACCTCC GACCAGATGC TGCAGAAGCT CGGTCAGCTC
TGA
 
Protein sequence
MMRALWISKT GMEAQQTQLD VVSNNLANVA TNGYKKSHAV FEDLMYQTLR QSGAASSEQT 
QLPTGLQVGL GVRTVATSRQ FTQGNLQQSG NTLDVAIKGN GFFPIQMPDG TTGYTRDGAF
QVSATGQLVT SAGYAVQPGI TIPADAQTVT IAPDGVVSVA LPGQTAPQVL GQLQVANFIN
PAGLEAKGGN LYTETASSGT PNGGAPGSNG LGSLSQGFLE TSNVNVVEEL VTMIQTQRAY
ELNSKAISTS DQMLQKLGQL