Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2727 |
Symbol | flgI |
ID | 6163465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3009516 |
End bp | 3010694 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641665504 |
Product | flagellar basal body P-ring protein |
Protein accession | YP_001791757 |
Protein GI | 171059408 |
COG category | [N] Cell motility |
COG ID | [COG1706] Flagellar basal-body P-ring protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0000228637 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACACGC TGCTTGACTC GCTGACCGGC CCGCTGGCCG AACGCCAGAA AGACCTGCAG GATCGCCTGC TGCGCGGCGC CCTCTGGCTG GCGCTGGTGC TGGCCAGCAC GGCACTCTGG TGGCCGGCCC CCGCCCACGC CACCCGCATC AAGGAAGTCG CCAGCGTGCA GGGCGTGCGG CCCAACCAGC TGGTCGGCTA CGGCCTGGTG GTGGGCCTGG ACGGCACCGG CGACCAGACC ACGCAGACCC CGTTCACCGC GCAGAGCCTG ACGGCGATGC TGCAGCAGCT CGGCGTGACC GTGCCGCCGG GCACCAACAT GCAGATCAAG AACGTCGCCG CGGTGATGGT GACGGCCACG CTGCCGCCGT TCGCGCAGCC CGGCCAGTCG GTCGACGTGA CCGTGGCCTC GCTCGGCAAC GCCAAGAGCC TGCGCGGCGG CACGCTGATC GGCACGCCCC TGCGCGGCGC CGACAACCAG ATCTACGCGC TCGCGCAAGG CAACCTGATC ATCGGTGGCG CCGGCGCCTC GGCGGGCGGC TCGAAGGTGC AGGTCAACCA CCTGTCGGCC GGCCGCATCC CCGACGGCGC CACCGTCGAG CGCGCGGTGC CCACGCCGCT GGCCGAGGGC GATTCGCTGC AGCTCGACCT CAAGTCGAGC GATTTCGCCA CCGCCCGCGC GGTCTCGCAG GCCATCAATG AACGCTTCGG CAAGGGCACG GCCAGCGCGA TGGACGGCCG CGTGGTGCGC GTCAAGATGC CCGCCACGCC CGACGAGCGC GTCAACTTCC TGGCCGACAT GGAAAACCTG GCGATCGAGC TGGCCAAGCC GGCCGCCAAG GTCATCGTCA ACGCCCGCAC CGGCTCGATC GTGATGAACC AGGCCGTCAC GCTGGCCGCC TGCGCGGTGG CGCACGGCAA CCTGTCGGTC ACGATCACCT CGACGCCGCA GGTCAGCCAG CCCGCGCCGT TCTCGAACGG CCAGACCACC GTCACCGAAA AGACCGACAT CAAGATCAAC CAGGAGCCCG GCTCGCTGAT CCAGCTGAAG GAAGGCACCC AGCTCACCGA CGTGGTGAAG GCGCTCAACT CGCTCGGTGC CACGCCCGGT GACCTGCTGG CGATCCTGCA GGCGATCAAG GCGGCGGGCG CCCTGAACGC GGAGCTGGAG GTCATCTGA
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Protein sequence | MDTLLDSLTG PLAERQKDLQ DRLLRGALWL ALVLASTALW WPAPAHATRI KEVASVQGVR PNQLVGYGLV VGLDGTGDQT TQTPFTAQSL TAMLQQLGVT VPPGTNMQIK NVAAVMVTAT LPPFAQPGQS VDVTVASLGN AKSLRGGTLI GTPLRGADNQ IYALAQGNLI IGGAGASAGG SKVQVNHLSA GRIPDGATVE RAVPTPLAEG DSLQLDLKSS DFATARAVSQ AINERFGKGT ASAMDGRVVR VKMPATPDER VNFLADMENL AIELAKPAAK VIVNARTGSI VMNQAVTLAA CAVAHGNLSV TITSTPQVSQ PAPFSNGQTT VTEKTDIKIN QEPGSLIQLK EGTQLTDVVK ALNSLGATPG DLLAILQAIK AAGALNAELE VI
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