| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2725 |
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| Symbol | |
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| ID | 6160616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3006548 |
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| End bp | 3008470 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665502 |
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| Product | flagellar hook-associated protein FlgK |
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| Protein accession | YP_001791755 |
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| Protein GI | 171059406 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1256] Flagellar hook-associated protein |
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| TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000557458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCACGT CCACGCTCCT GAACCTGGGC ACGCGGGCGA TGTTCGCCTC GCAGGCGCAG
TTGCAGACCA CCGGCCACAA CATCGCCAAC GCCAACGTGG CGGGCTATTC GCGCCAGGAC
ACCGTGCTGA CCACGGTCGG CGGCCAGTAC AGCGGCGCCG GCTACTACGG CCGCGGCGTG
GCGGTGCAGA CCGTCACGCG CGCGGTCAGC GCCTTCCAGA CCGACCAGGT GGCGCAGACC
CGCGCCCAGG CCGCTGCCGA TTCGACCCGC TCGGACATGC TGTCGCGCCT GCAGGATTCC
TTCGGCACCG GCGAGGCCGG GCTGGGTTTT GCCGCCACCA AGCTGTTCAA CGCCTTCAGC
GACGTGGCCT CGTCACCGGC CGACCCGTCG GCGCGCCAGG TGGTGCTGGC GCGCAGCGAG
GAGCTGGCGT CGCGCTTCCG GGCCTCGAGC GACCAGATCG AGGCGCTGCA GCTGTCGGTG
ACCGAGGACG TCGGCAACAC GGTCAACACC ATCAACGGCC TGGCGCAGAG CGTGGCCGAG
CTCAACCAAC AGATCGCCAG CACCCGCGGC AGCGGCCAGG AACCCAACGA CCTGCTCGAC
CAGCGCGACC AGCTCGTCAA TGAGCTGAGC CAGCACGTGC AGGTGACGCG GCTCGAGCAG
GACGACGGCT CGCTCAACCT GTTCATCGGC GGCGGCCAGA GCCTGGTGCT GGGCAACGCG
GCCTACGAGA TGGTGGCGCG CGCCGACCGG TTCGATCCGG CCCGGGTCGA GGTGGCGGTC
AAGGTGGCCG GCGTCGAGCG GCCGTTCGAC CAGCAGTCGC TCGGCGGCGG CACGCTGGCC
GGCCTGATCG GCTTCCAGAA CAACGACCTG AGCGCCGCCC GCGACCAGCT CGGCCAGCTC
GCCAGCACGC TGGCCAGCGA GGTCAACCGG CAGCAGTCGC TCGGCCTGAG CCTGGGCGGC
ACGGCCGGCG ACCCGCTGTT CCGCCACGTC GCGGCCAACG CGGTGCCGGC CGCCGGCAAT
GCGAGCGATG CCGCCGGCAA CCCGGCGGGC AACGTCGCCC TGACCATCAC CGACAGCCGG
GCGCTGCAGG CCAGCGAGTA CGAGCTCAGC GTCAACGCCG ACGGCAGCTT CGACGTGCTG
CGGCGCAGCG ACGGCCAGCG CAGCGCCGGC CTCGTCAACG GCGCCGAGGT CGACGGCTTC
CGGATCGACT TCGGCAGCTC GGCGCCGCTG GCCGGTGACC GCTTCCTGCT GCAGCCGGTG
GGCGGTGCCG CGCAGTCGAT CGAGCTGGCC CTGACCGACC CGAAAGGCAT CGCCGCCGCC
AGCCCGATCA GCGTGACCGC GGCGCCGTCC AACCAGGGCA CCGGCCGGCT CAACTCGGTG
GTGATCGAGA CCGCCGCCGC CACGCCCTAC GGCAGCATGA CGCTGGCGTT CGGCGCCACC
AGCGCCGGTG GCGGGCGCGA CTACCAGCTG CTCGACAGCG GTGGCAGCCT GCTCTCGAGC
GGCACCTGGA GCGCGGGCAC GCCGATCCGC TACGACGGCG TCGCCATCAA GATCGACGGC
GTGCCGGCCG AGGCCGACAC CTTCGCGGTC GGGCCGACCA CCTTCGCCGC CTCGAGCAAC
GGCAACGCGC TGGCGCTGCA GGGCCTGGCC GACACCGCGA TGACGCTCGG CCAGACCTTC
ACCAACAGCT ACGCGCAGAC CCTGTCGGAC ATCGGCGTGC GGGTGCAGAG CGCCCAATCG
GCGGCGACCG TCTCGGCCGG CGTGGCCGAT CGCGCCAAGG AAGAGCTCGG CGCGCAGACC
GGCGTCAATC TCGATGAAGA GGCCGCCCGG CTGCTGCAGT ACCAGCAGGC CTACCAGGCG
GCCGCCAAGA TCCTGCAGAC GGCGCAGAAG GTGTTCGACA CCGTGCTGTC GCTGGGCGGC
TGA
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| Protein sequence | MSTSTLLNLG TRAMFASQAQ LQTTGHNIAN ANVAGYSRQD TVLTTVGGQY SGAGYYGRGV
AVQTVTRAVS AFQTDQVAQT RAQAAADSTR SDMLSRLQDS FGTGEAGLGF AATKLFNAFS
DVASSPADPS ARQVVLARSE ELASRFRASS DQIEALQLSV TEDVGNTVNT INGLAQSVAE
LNQQIASTRG SGQEPNDLLD QRDQLVNELS QHVQVTRLEQ DDGSLNLFIG GGQSLVLGNA
AYEMVARADR FDPARVEVAV KVAGVERPFD QQSLGGGTLA GLIGFQNNDL SAARDQLGQL
ASTLASEVNR QQSLGLSLGG TAGDPLFRHV AANAVPAAGN ASDAAGNPAG NVALTITDSR
ALQASEYELS VNADGSFDVL RRSDGQRSAG LVNGAEVDGF RIDFGSSAPL AGDRFLLQPV
GGAAQSIELA LTDPKGIAAA SPISVTAAPS NQGTGRLNSV VIETAAATPY GSMTLAFGAT
SAGGGRDYQL LDSGGSLLSS GTWSAGTPIR YDGVAIKIDG VPAEADTFAV GPTTFAASSN
GNALALQGLA DTAMTLGQTF TNSYAQTLSD IGVRVQSAQS AATVSAGVAD RAKEELGAQT
GVNLDEEAAR LLQYQQAYQA AAKILQTAQK VFDTVLSLGG
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