| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2712 |
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| Symbol | |
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| ID | 6162318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2984145 |
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| End bp | 2985056 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665489 |
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| Product | DNA ligase |
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| Protein accession | YP_001791742 |
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| Protein GI | 171059393 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0226859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAC GACCGGATCG ACGACGCTGG CTGGCCTGGG GCCTGGCCCA GGCCTGGGCT
GTACCGATGG CGGGGGCGCT CGGCAGCCTC GGCCTGCGGC ATGACTCGGC CCGGGCCGAG
CCTCTTGCCC CCGTTCCGCC GGCCCTGCTG CTGGCCAGGC CCGCCGGGCC GGACCTGGAT
GTTTCGAGCC ATCTGGTCAG CGAAAAGCTC GACGGCGTGC GGGCCTTCTG GAGCGGTCGG
CAATTGCTGC TGCGCAGTGG CATCCCGATC CGGGCGCCGG CGGATTTCAC CGCCCGGCTG
CCGACGCGTG CCCTTGACGG CGAACTCTGG CTCGGTCGCA GCCGCTTCGA CGCGATGTCG
GCGCTGATCC GGCGCGAGCA TTCGGCCGAC GACCCGCTCT GGCGCGAGGT GCGTTATGCC
GTGTTCGAGC TGCCGGACGC GCCGGGCGAC TTCGCTCAGC GGCATCGGGC GATGCGCGAA
CTGCTGCCCG GCACCGACGC CGTGGCGGGC GCGCACGTGG TGCAACAGCG CCGCCTTGAC
GATCGGCAGG AACTCGACCG CTGGCTGGCC GAAGTGATCG CCGCCGGCGG GGAAGGGCTG
ATGCTGCACC GCGCCGATGC ACCCTACGTC ACCGGCCGCA GCGACTGGCT CCTGAAGCTC
AAGCCGCAGC TCGATGCCGA GGCGATGGTG ATCGGCCACC TGCCCGGCAA GGGCCGCCAC
GCCGGCCGGC TCGGCGCCTT GCGGGTGCGC ACGCCCGACG GCAGGGAGTT CGCGCTGGGC
TCGGGCCTGT CGGACGCCGA ACGCGACGAT CCGCCCGCGC CGGGCCGTTG GGTGACCTAT
CGCTACCGCG GCCTCACGAA CAGCGGGCTG CCGCGCTTCG CGACCTTCTG GCGCATGCAC
GATCTGCCTT GA
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| Protein sequence | MDTRPDRRRW LAWGLAQAWA VPMAGALGSL GLRHDSARAE PLAPVPPALL LARPAGPDLD
VSSHLVSEKL DGVRAFWSGR QLLLRSGIPI RAPADFTARL PTRALDGELW LGRSRFDAMS
ALIRREHSAD DPLWREVRYA VFELPDAPGD FAQRHRAMRE LLPGTDAVAG AHVVQQRRLD
DRQELDRWLA EVIAAGGEGL MLHRADAPYV TGRSDWLLKL KPQLDAEAMV IGHLPGKGRH
AGRLGALRVR TPDGREFALG SGLSDAERDD PPAPGRWVTY RYRGLTNSGL PRFATFWRMH
DLP
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