| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2689 |
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| Symbol | |
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| ID | 6162670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2956805 |
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| End bp | 2957875 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665466 |
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| Product | L-asparaginase, type II |
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| Protein accession | YP_001791719 |
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| Protein GI | 171059370 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.373089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC TCGTCCGAAC CCTGGCGTCC ACCTTCGTCG CCATGACCCT GGCCGCTGCC
GTGCATGCCC AGGTGCCCGC GAAACCGCAG GTCGTGCTGC TGGCGACCGG CGGCACCATC
GCCGGTGCCG GCGCCAGCGC AGCCAACAGC GCCACGTACC AGGCCGCCAA GGTGCCGGTC
GACAAGCTGA TCGCCGGCGT GCCCGAACTG GCCCAGGTGG CCGCGGTGCG CGGCGAGCAG
GTCTTCCAGA TCGCCTCCGA AAGTTTCACC AACGAGCACC TGCTGACACT GGGCAAGCGC
GTCGCGGCAC TGGCCAGGCA GCCCGAGGTC GACGGCATCG TCATCACCCA CGGCACCGAC
ACGCTGGAAG AGACGGCCTT CTTCCTCGGC CTGACCGTCC GCACCGACAA GCCGGTGGTG
GTGGTCGGCT CGATGCGGCC GAGCACCGCG CTGTCGGCTG ACGGCACGCT CAACCTGCTG
AACGCGGTGA CGGTGGCCTC CAGCAAGGAC AGCCGCGGCA AGGGCGTGCT GGTGGTCATG
AACGACGAGA TTCACAGCGG CCGCGACGTC AGCAAGAGCA TCAACATCAA GACCGAGGCG
TTCAAGAGCG CCTGGGGTCC GCTGGGCATG GTGGTCGAAG GCAGGACCTA CTGGTTCCGC
GCGCCGGTCA AGCGCCACAC CCTGACGTCC GAGTTCGACA TCGAGGCGAT CAAGGCCCTG
CCGCAGGTCG ACATCGCCTA CGGCTACGGC AACGCCAGCG ACGTGGCCCA GCGTGCCTTC
GTCGCCAAGG GCGCCAAGGC GCTGATCCAC GCAGGCACCG GCAACGGCTC GGTCGCGGCG
CCGGTGGTGC CGGCCTTGCG TGAACTGCGT GCGCAGGGCG TGCAGATCAT CCGTTCGGCG
CGGGTGGTGG GTGGCGGCTT CGTGCTGCGC AACGCCGAGC AGCCCGACGA CCAGTACGAC
TGGGTCGTCT CGCATGACCT CAATCCGCAG AAGGCCCGCA TCCTGGCGAT GGTGGCGCTG
GCCAACGGCA GCGACAGCAA GAGCCTGCAG CGGGTGTTCA TGGAGTACTG A
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| Protein sequence | MMKLVRTLAS TFVAMTLAAA VHAQVPAKPQ VVLLATGGTI AGAGASAANS ATYQAAKVPV
DKLIAGVPEL AQVAAVRGEQ VFQIASESFT NEHLLTLGKR VAALARQPEV DGIVITHGTD
TLEETAFFLG LTVRTDKPVV VVGSMRPSTA LSADGTLNLL NAVTVASSKD SRGKGVLVVM
NDEIHSGRDV SKSINIKTEA FKSAWGPLGM VVEGRTYWFR APVKRHTLTS EFDIEAIKAL
PQVDIAYGYG NASDVAQRAF VAKGAKALIH AGTGNGSVAA PVVPALRELR AQGVQIIRSA
RVVGGGFVLR NAEQPDDQYD WVVSHDLNPQ KARILAMVAL ANGSDSKSLQ RVFMEY
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