| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2676 |
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| Symbol | |
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| ID | 6162858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2935702 |
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| End bp | 2936958 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665453 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001791706 |
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| Protein GI | 171059357 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCT TCAAGACCTT CCTGCGATCA GGCCACTGGC CGACCTTGCT GGCGTCCTTT
CTCTATTTCG ACTTCTGCTT CGCGATCTGG GTGCTCAACG GCGCCATGGG TCCGTTCATC
AGCGAAACCT TCAACCTGAG CCCGGCCGAA AAGGGCTTCA TGATCTCGGT GCCGATCCTG
GCCGGCGCGC TGATGCGCTT TCCGCTGGGC GTGCTGTCGC AGTACATCGG CCGCAAGAAC
GCCGCGATGG TCGAGATGGG CCTGATCGTC GGCGCCCTGG CCTACGGCTA TTTCGCGGTC
GACACCTACA ACGAAGTGCT GGCGATGGGC GTGCTGCTGG GAATCGCCGG CGCCAGCTTC
GGCGTGGCGC TGTCGCTGGG CTCGGGCTGG TTCCCGCCCA AGTACAAGGG CCTGGCGATG
GGCATCGCCG GCGCCGGCAA CTCGGGCACC GTGCTGGCCG TGCTGTTCGC ACCGCCCCTG
GCGGTCAAGT TCGGCTGGCA GGCGGTCTAC GGCCTGGCGG CCTTCACGAT GCTGCTGCCG
ATGGCCGTGA TGTGGTTGGC CGCCAAGGAG CCGCCCGACA CCGAGCACCA GAGCCTGCGC
GAGCACACCG CCTGCCTGTT CGAGAAGGAC GGCTGGGCCT TCAGCCTGAT CTACATCGTC
ACCTTCGGCG GTTTCATCGG CCTGGCGAGT TTCCTGCCGA CCTACTTCTA CGACCAGTTC
AAGGTCACCA AGGTCGAGGC CGGCCAGCTC ACGATGCTGG CCACGCTGAT GGGCTCGGCG
GTGCGCGTGG TGGGCGGCTA CATCTCCGAC CGCATCGGCG GCATCAACAC GCTCAGCGGC
GTGCTGGTGC TGGTAGCGAT CACGCTGACG CTGTGCGGCG TGGCCGGCGG CTCGCTGGCG
GTCACCACGC TGCTGTTCAT GCTGTGTTTT GCCGCGCTGG GCGCGGGCAA CGGCGCGCTG
TTCCAGCTGG TGCCGCTGCG CTGGCCGCTG ACCACCGCGG TGGCGGGCTC GATGATCGGC
GAGATCGGCG CGCTCGGCGG CGGTTTCCTG CCCAACGCGA TGGGCCTGTC CAAGCAGTTC
GTCGGCAGCT ATCTGTGGGG ATTCCTCTCG TTTGCGCTGC TGGCCCTGCT GATGCTCGGC
ATGCTGCGCA TCGTGCAGAT CCGCTGGACC CGCACCTGGG CCGAAAAGGG TGGCCGTGCC
CGCACCACGC ACGACGCCGC GGTCGCCACC GGCTCGGCCA CCCGCTTGGC CCGCTGA
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| Protein sequence | MAGFKTFLRS GHWPTLLASF LYFDFCFAIW VLNGAMGPFI SETFNLSPAE KGFMISVPIL
AGALMRFPLG VLSQYIGRKN AAMVEMGLIV GALAYGYFAV DTYNEVLAMG VLLGIAGASF
GVALSLGSGW FPPKYKGLAM GIAGAGNSGT VLAVLFAPPL AVKFGWQAVY GLAAFTMLLP
MAVMWLAAKE PPDTEHQSLR EHTACLFEKD GWAFSLIYIV TFGGFIGLAS FLPTYFYDQF
KVTKVEAGQL TMLATLMGSA VRVVGGYISD RIGGINTLSG VLVLVAITLT LCGVAGGSLA
VTTLLFMLCF AALGAGNGAL FQLVPLRWPL TTAVAGSMIG EIGALGGGFL PNAMGLSKQF
VGSYLWGFLS FALLALLMLG MLRIVQIRWT RTWAEKGGRA RTTHDAAVAT GSATRLAR
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