Gene Lcho_2669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2669 
Symbol 
ID6161846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2929036 
End bp2929509 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content68% 
IMG OID641665446 
Producthypothetical protein 
Protein accessionYP_001791699 
Protein GI171059350 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGC GCCAATACTG GCTGATGAAA AGCGAGCCCG AAGAGTGCTC CATCGACACG 
CTGGCTCAGT CCGTGAGCCA GTGCCTGCCG TGGACCGGGG TGCGCAACTA CCAGGCGCGC
AATTTCATGC GCGACGCGAT GCAGGTCGGC GACGGCGTGC TGTTCTATCA CTCGTCGTGC
CCGCAGCCGG GTGTCGCCGG GCTGGCTGAA GTGGCCTCTG CGGCCTACCT CGACGCCACC
CAGTTCGACC CCGCCAGCCC CTACTTCGAC GCCAGGTCGC AGCGCGAGGC ACCCCGCTGG
CTGCATGTCG ACGTGCGCTT CGTGCGCAAG ACCCGGCTGC TCGGTCTGGC CGAGATGCGC
GCCCAGCCCG GCCTGGCCGG CATGACGCTG CTGCGCCCGG GCAATCGCCT GTCGATCACG
CCGGTGACAC CGGCCGAATG GCAACTCATT CTCGAACTGC TCGAACGCAC ATGA
 
Protein sequence
MPARQYWLMK SEPEECSIDT LAQSVSQCLP WTGVRNYQAR NFMRDAMQVG DGVLFYHSSC 
PQPGVAGLAE VASAAYLDAT QFDPASPYFD ARSQREAPRW LHVDVRFVRK TRLLGLAEMR
AQPGLAGMTL LRPGNRLSIT PVTPAEWQLI LELLERT