Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2669 |
Symbol | |
ID | 6161846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2929036 |
End bp | 2929509 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641665446 |
Product | hypothetical protein |
Protein accession | YP_001791699 |
Protein GI | 171059350 |
COG category | [S] Function unknown |
COG ID | [COG2947] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCGC GCCAATACTG GCTGATGAAA AGCGAGCCCG AAGAGTGCTC CATCGACACG CTGGCTCAGT CCGTGAGCCA GTGCCTGCCG TGGACCGGGG TGCGCAACTA CCAGGCGCGC AATTTCATGC GCGACGCGAT GCAGGTCGGC GACGGCGTGC TGTTCTATCA CTCGTCGTGC CCGCAGCCGG GTGTCGCCGG GCTGGCTGAA GTGGCCTCTG CGGCCTACCT CGACGCCACC CAGTTCGACC CCGCCAGCCC CTACTTCGAC GCCAGGTCGC AGCGCGAGGC ACCCCGCTGG CTGCATGTCG ACGTGCGCTT CGTGCGCAAG ACCCGGCTGC TCGGTCTGGC CGAGATGCGC GCCCAGCCCG GCCTGGCCGG CATGACGCTG CTGCGCCCGG GCAATCGCCT GTCGATCACG CCGGTGACAC CGGCCGAATG GCAACTCATT CTCGAACTGC TCGAACGCAC ATGA
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Protein sequence | MPARQYWLMK SEPEECSIDT LAQSVSQCLP WTGVRNYQAR NFMRDAMQVG DGVLFYHSSC PQPGVAGLAE VASAAYLDAT QFDPASPYFD ARSQREAPRW LHVDVRFVRK TRLLGLAEMR AQPGLAGMTL LRPGNRLSIT PVTPAEWQLI LELLERT
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