| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2666 |
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| Symbol | |
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| ID | 6161842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2925891 |
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| End bp | 2927807 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665442 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001791696 |
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| Protein GI | 171059347 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA ACCTCCAGGC GCGCCATGCG CCGTCGGCCC TGCGCGTCCT GTGCCTGGCT
GCGATCTCGG CTGTCAGCGG CACCGCCGTC GCACGAGCTG CGCTCGATCC GGTGCTGATC
ACCGGCACCC GTTTTGCAGA TGAAGCCGAC GCCCAGCCGA TCGGCATCAG CGTGATCACG
GCCGAACAGA TCCGCCGCGG CGGCTACACC ACGATCAACG AGGCGGTGAT GCGCCAGCTC
GGCGTGGCCG GCCGGCTCGA CCTCAACGGC GGTGGCGAAT ACGCGCTCGA CCTGCGCGGC
TTCGGCAGCA CCTCCGACAA CAACATGGCG ATCGTGGTCG ACGGCATCCG CATCAGCGAG
GGTGACCTCG GCGGCACCCG CCTGGCCGGC ATCCCGATCG AGACCGTCGA ACGCATCGAG
GTGCTGCGCG GCAGCAGCGC CGTGCTTTAT GGCGAGGGCG CCACCGCCGG CGCGATCGTC
ATCACCACCA AGGCCGGCCG CGGCGTGGCT CGCGCCGACC AGGCGCAGGT CTACGCTGCC
GGTGGCACGC AGGGCCGGCG TGAACTGCGT GGCGCGGCCA CCGTCAATGC GGGCGATTTC
AGCTTCGACC TCGCCGCCCA GCGCCGCCTG GCCGACAACC ACCGCGACAA CTTCGCGTCG
GCGGTCAGCG GCGTCTCGCT GGCGGCTCAG TGGCAGCTCG ATCAGCTGCG GGTCGTGGCG
CGCCATGCCG CCGACAGCCT CGCCACCGGC CTGCCCGGCG CCTTGAGCAC CGCGCAGTAC
GCCGCCGACC CCAGCCAGGC GTCCAGCCTG ACCGACCATG GCCGCATCGA CGCCCGTCGC
AGCACCCTCA CCGCCGAATA CAAGGGCGGC GACTGGGAGC TCGCGTTCGA CCTCGGCACG
CGCCACAAGG AGCTGCGCAG CATCAACGGC GGCTTTCCTT TCGACTACGA CGTCGACGCC
AGTACCGCCG GCGTGCGTGC CCGCCACGTC GGCCGCATCG CCAGCCTGCG CAACCAGCTC
CGCTTCGGCA TCGACCATGC GCGCTGGGAG CGCGACGTGC TGCCGACGGG CTTGCCGGAC
GTGCAGCGCA ACCGCGGCAT CTACGTCAAG GACGAGCTGA CCCTGGCCAA CGGCAGCAGC
CTGTCGGCCG GCCTGCGGCG CGAGCAGGTC GACAAGGATG CCAACACCTT TGCCGGCCCG
GCCAGCGTGT CCGACGGGAT CAACGCCTGG GAGATCGGCG CGGTCCACCC CGTCACCGCG
CAGACCCAGG TCTATGCGCG CTGGGGCACC AGCTTCCGCC TGCCCAACGC CGACGAGCTC
AGCAATGCCG GCCTGCGGCC GCAGACCTCG CGCGACCTGG AGCTCGGCAC GCGCTGGCGT
GGCAGCGACA GCCGCTTCGA GGCCCGCATC TACCGCAGCC GCCTGAGCGA CGAGATCGGC
TTCGACGGTG CGACGTTCCA GAACGTCAAC TTCGAACGCA CCCGTCGCGC CGGCCTGGAG
TTCGAGGCCA GCCACGTGCT GAACGCCAGC GTCGACCTGC GCGCCGCCGG TGCGCTGCGC
CGTTCGCGTT TCGACGCCGG GGCCAACGCC GGCCGCGACA TCCCGCTGGC GGCGCGCCGC
AACGCCTCGG TCGGCGCCAG CTGGCAGTTC CTGCCGCAGC ATCACCTGGG CGCCGACCTG
GTTTACACCG GCACCCAGTT CCCGACCGCT GCCAACAGCT GCCGCATGGA GGCCGCGACC
ACGCTGGACT TGCGTTACGC GTGGCGGCTG CCCAAGCTGG AGCTGAGCCT GGCGATGGCC
AACGCCGCCG ATCGCCAGTA CACCACGCAG GCCTTCGGCT GTGCGGCGGG CCAGGTCACG
GCGATCTACC CCGAGCCCGG CCGCGCCGTG TTGGCCTCGG CCCGGATGTC GTTCTGA
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| Protein sequence | MKFNLQARHA PSALRVLCLA AISAVSGTAV ARAALDPVLI TGTRFADEAD AQPIGISVIT
AEQIRRGGYT TINEAVMRQL GVAGRLDLNG GGEYALDLRG FGSTSDNNMA IVVDGIRISE
GDLGGTRLAG IPIETVERIE VLRGSSAVLY GEGATAGAIV ITTKAGRGVA RADQAQVYAA
GGTQGRRELR GAATVNAGDF SFDLAAQRRL ADNHRDNFAS AVSGVSLAAQ WQLDQLRVVA
RHAADSLATG LPGALSTAQY AADPSQASSL TDHGRIDARR STLTAEYKGG DWELAFDLGT
RHKELRSING GFPFDYDVDA STAGVRARHV GRIASLRNQL RFGIDHARWE RDVLPTGLPD
VQRNRGIYVK DELTLANGSS LSAGLRREQV DKDANTFAGP ASVSDGINAW EIGAVHPVTA
QTQVYARWGT SFRLPNADEL SNAGLRPQTS RDLELGTRWR GSDSRFEARI YRSRLSDEIG
FDGATFQNVN FERTRRAGLE FEASHVLNAS VDLRAAGALR RSRFDAGANA GRDIPLAARR
NASVGASWQF LPQHHLGADL VYTGTQFPTA ANSCRMEAAT TLDLRYAWRL PKLELSLAMA
NAADRQYTTQ AFGCAAGQVT AIYPEPGRAV LASARMSF
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