| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2648 |
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| Symbol | |
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| ID | 6161168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2910729 |
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| End bp | 2912168 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665424 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001791678 |
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| Protein GI | 171059329 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTTG ACGACCTGGG CCTGGCCCAG CCGATCCTTC GTGCCGTGCA CGAAGAAGGC
TATTCGATCC CCACCCCGAT TCAGGCGCAA GCCATCCCCG CCGTGCTCGC CGGCGGTGAC
CTGCTGGCCG GCGCACAGAC CGGCACCGGC AAGACCGCCG GTTTCACGCT GCCGCTGCTG
CACAAGCTCG CCGCGGGCGA GCCGGTCAAG AACCGCAACG GCCGCCCGGC GATCCGCGCG
CTGATCCTCA CCCCCACGCG CGAACTCGCC GCCCAGGTCG AAGAAAGCGT GCGCACCTAC
GGCAAGTACC TGCAGCTCAC CAGCATGGTG ATCTTCGGCG GCGTCGGCAT GGGCCCGCAG
GTCGACCGGC TGCGCAAGGG CGTCGACATC CTGGTGGCCA CGCCCGGGCG CCTGCTGGAC
CACCACCAGC AAGGCACCAT CGACCTCAGC CAGGTGCAGT TCTTCGTGCT CGACGAAGCC
GACCGCATGC TCGACATGGG CTTCGTGCAC GACATCAAGA AGGTGCTGGC CATCATCCCG
GCCAAGAAGC AGAGCCTGCT GTTCTCGGCC ACCTTCAGCG ACGAGATCAA GGCGCTGGCC
GACCGGCTGC TCAACAAGCC GCAGGTGATC GAGGTGGCGC GCCGCAACAC CACCGCCGAG
ACCATCGCCC AGCGCGTCAT CAAGGTCGGC CGCGAGAACA AGAAGGACCT GCTGGCCCAC
CTGATCAAGA GCCAGAACTG GCACCAGGTG CTGGTGTTCA CGCGCATGAA GCACGGCGCC
AACCGGCTGT GCGAGTTCCT GAACAAGAAC GACATCAGCG CGATGGCGAT CCACGGCAAC
AAGAGCCAGG GTGCACGCAC CAAGGCCCTG GCCGAGTTCA AGACCGGTGA CCTGACGGTG
CTGGTGGCGA CCGACATCGC CGCGCGCGGC ATCGACATCG ACATGCTGCC GCACGTCATC
AACTACGAGC TGCCCAACGT GCCGGAAGAC TACGTGCACC GCATCGGCCG CACCGGCCGC
GCCGGCGCGC AGGGCGAGGC GCTGTCGCTG GTGTGCGTCG ACGAAGAAGG CTTCCTGGCC
GACATCGAGA AGCTCATCAA GCGCAGCATC GCGCGCGAGG TGGTGGCCGG TTTCGAGCCC
GATCCGGGCG AGCGTGCCGA GCCGATCCAG GTGGGTCGCC GCACGCTCAA CGGTGCTCCG
CGTGGTGCAC ACCGCCCGTC GGGCAACGGT GCGCCGAAGC CGACCCATCG TGGTGGCAAC
TCGTCGGCAC CGCGTTCGAG CGCCGGACAT GCCTCGGGAA ATGGCAATCA CTCGGCACAT
GCCCGTCCGG CTGGCCAGCA ACCGCGCTCC GGTCAGCCCA ACGGCGCCGG TCGCAGCAGC
CAGGGCACGG CACAACCGGG TGCGCTGAAC CGCACGCCGC CGCGCTCACG CAACGGCTGA
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| Protein sequence | MTFDDLGLAQ PILRAVHEEG YSIPTPIQAQ AIPAVLAGGD LLAGAQTGTG KTAGFTLPLL
HKLAAGEPVK NRNGRPAIRA LILTPTRELA AQVEESVRTY GKYLQLTSMV IFGGVGMGPQ
VDRLRKGVDI LVATPGRLLD HHQQGTIDLS QVQFFVLDEA DRMLDMGFVH DIKKVLAIIP
AKKQSLLFSA TFSDEIKALA DRLLNKPQVI EVARRNTTAE TIAQRVIKVG RENKKDLLAH
LIKSQNWHQV LVFTRMKHGA NRLCEFLNKN DISAMAIHGN KSQGARTKAL AEFKTGDLTV
LVATDIAARG IDIDMLPHVI NYELPNVPED YVHRIGRTGR AGAQGEALSL VCVDEEGFLA
DIEKLIKRSI AREVVAGFEP DPGERAEPIQ VGRRTLNGAP RGAHRPSGNG APKPTHRGGN
SSAPRSSAGH ASGNGNHSAH ARPAGQQPRS GQPNGAGRSS QGTAQPGALN RTPPRSRNG
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