| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2621 |
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| Symbol | |
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| ID | 6162993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2872308 |
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| End bp | 2872862 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665397 |
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| Product | type II secretion system protein G |
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| Protein accession | YP_001791651 |
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| Protein GI | 171059302 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGAAAT TCATGGAACG CTCCCCCGCA CGGGCACCCC GGACGAGCCG CAGGGGCGCG
GCGCGTGGCT TCACGCTGAT GGAACTGGTG GTCGTGATGA CGGTGATCGG CCTGCTGCTC
ACGCTGGCCC TGCCGCGTTA TCTCGACACC ATCGACCGCG GCAAGGAGAA GGTGCTCGAG
CGCAACCTGG CGCTGATGCG CGAGGCGATC GACCGCTATT ACGGCGACCA GGGCCGCTAT
CCCGACCGGC TCGAGGACCT CGTCACCAAA CGCTACCTGC GCGCGATCCC GCCCGACCCG
TTCATCGAGA ACGCGACCTG GGTCGTGATC GCACCGCCCG ACCCCAGCCT GGGCGGCGTG
ATCGACGTCG ACACCACCGG GAACGACCTG CAGGGCCGCC CGCGCAGCGC CCGCATGATC
GCCCCGACCG AGGCATCCGA AGACGGCCAG GTCGCCGCCA CGCCCGGCGG CGAGGCCACG
CCGCGCAACC CGGCGCAGAG CGGCAGCCGG CAGACCGTCA CCGTCAGCCC TGGCGGGGAC
GGATTCGGGC GCTGA
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| Protein sequence | MVKFMERSPA RAPRTSRRGA ARGFTLMELV VVMTVIGLLL TLALPRYLDT IDRGKEKVLE
RNLALMREAI DRYYGDQGRY PDRLEDLVTK RYLRAIPPDP FIENATWVVI APPDPSLGGV
IDVDTTGNDL QGRPRSARMI APTEASEDGQ VAATPGGEAT PRNPAQSGSR QTVTVSPGGD
GFGR
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