| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2600 |
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| Symbol | |
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| ID | 6163513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2846104 |
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| End bp | 2847294 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665376 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_001791630 |
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| Protein GI | 171059281 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.492563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG CCCTGCCCGC CTCGATGCCC GTCCCCGTCA GCCGCCTGCC CGCGGTCGGC
ACGACCATCT TCACCGTGAT GTCGGCCCTT GCACAGGAGA CCGGCGCGGT CAACCTCGGC
CAGGGGTTCC CGGATTTCGA CGGCGACCCG CGCCTGATGC AGGCAGTCAA GGACGCGCTC
GACGCCGGCC ACAACCAGTA CCCGCCGATG GCCGGCGTGG CGCTGCTGCG CGAGGCGATC
GCTGCCAAGA TCGAGACACT CTACGGCCAG CGCTACGACG CCGGCAGCGA GATCACCGTC
ACCGCCGGCG CCACCCAGGC GATCCTGACC ACCGTGCTGG CGCTGGTGCA TCCGGGCGAC
GAGGTGATCG TGCTCGAGCC CTGCTACGAC AGCTACGAGC CGAGCATCAC GCTGGCCGGC
GCGCGCACGG TGCACGTGCC GCTCACGCCG GGCACGTTCC GGCCCGATTT CGAGCGCCTG
GCCGCCGCCA TCACGCCGCG CACCCGGGCG CTGATCGTGA ACACGCCGCA CAACCCCAGC
GGCACGGTCT GGACCGAAGC CGAGATGCGC ACGCTCGCCG AGCTGCTGCG CCCGACGCCG
ATCATCCTGA TCGCCGACGA GGTCTACGAG CACATGGTGT ATGACGGCGC GGCACACCAG
AGCGTGGCGC GTTATCCGGA GCTGGCGGCG CGCAGCGTGC TGATCTCGAG CTTCGGCAAG
ACCTATCACG TGACGGGCTG GAAAGTGGCG TTCGCGGCCG CGCCGGCCGC GCTCAGCGCC
GAGTTCCGCA AGGTGCACCA GTTCAACGTG TTCACGGTCA ACACGCCGAT GCAGTACGCG
CTGGCCGCCT ACATGGCCGA TGCGGCGCCC TACCTCGGGC TGGCGGCGTT CTATCAGCGC
AAGCGGGACC TGTTCCGCGC CGGCCTGACG CAGACCGGCC TGCGGCTGCT GCCGTGCGAG
GGCACGTATT TCCAGTGTGT CGACTACAGC GGCCTGCCCG CCGCGGTGGC CACCCTGCCG
GAGGCCGATT TCTGCCGCTG GCTGACGCGC GAGGTCGGCG TGGCGGCGAT TCCGCTGTCG
GCCTTCTATC GCGACGGCTT CAACCAGCAG GTCGCACGGC TGTGTTTTGC CAAGCGTGAC
GAGACCCTGC AACTCGCGCT CGGCCGCCTG CAGCAGCACC TGCCGGGCTG A
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| Protein sequence | MTLALPASMP VPVSRLPAVG TTIFTVMSAL AQETGAVNLG QGFPDFDGDP RLMQAVKDAL
DAGHNQYPPM AGVALLREAI AAKIETLYGQ RYDAGSEITV TAGATQAILT TVLALVHPGD
EVIVLEPCYD SYEPSITLAG ARTVHVPLTP GTFRPDFERL AAAITPRTRA LIVNTPHNPS
GTVWTEAEMR TLAELLRPTP IILIADEVYE HMVYDGAAHQ SVARYPELAA RSVLISSFGK
TYHVTGWKVA FAAAPAALSA EFRKVHQFNV FTVNTPMQYA LAAYMADAAP YLGLAAFYQR
KRDLFRAGLT QTGLRLLPCE GTYFQCVDYS GLPAAVATLP EADFCRWLTR EVGVAAIPLS
AFYRDGFNQQ VARLCFAKRD ETLQLALGRL QQHLPG
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