| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2599 |
|---|
| Symbol | |
|---|
| ID | 6163512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 2845094 |
|---|
| End bp | 2846059 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641665375 |
|---|
| Product | transcriptional regulator CysB-like protein |
|---|
| Protein accession | YP_001791629 |
|---|
| Protein GI | 171059280 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.174943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGC ACCAGTTCCG CTTCGTGCAG GAGGCCGCGC GCCGCAACCT CAACCTGACC
GAAACCGCCA AGGCGCTGCA CACCTCGCAG CCTGGCATCT CGAAGGCCAT CCTCGAACTC
GAGGAAGAGC TCGGCGTCGA CATCTTCGTG CGCCACGGCA AGCGCCTCAA GCGCATCACC
GAGCCGGGCC AGCAGGTGCT GAAGTCGATC GAGGTGATCA TGCGCGAGGT CGTCAACCTC
AAGCGCATCG GCGACGACTT CTCGCTGCAG GACGTCGGCA CGTTGTCGAT CGCAGCCACC
CACACGCAGG CCCGTTACGT GCTGCCGGCG CCGGTGGCGG CGCTGCGCAG CAGCTACCCG
AAGGTCTCGG TCAGCCTGCA CCAGGGCACG CCCGACCAGG TGGCGCAGAT GGTGCTCGAC
GACGCCGCCG AAGTGGGCAT GGCGACCGAG CGCCTGATGC AGTACGAAGA CCTCGTCACG
CTGCCGTGTT ACGAGTGGCG CCACGTCGCG GTGATGCCGG CCGACCACCC GCTGGCGCTG
GTCGAGCGCA TCAGCCTGGA ACAGCTCGCA CACGAACCGC TGATCTCCTA CCACCCGTCG
TTCACCGGCC GCAGCAAGAT CGACGCGGCC TTCGAGGCGC GCAACCTCAA GCCGCAGATC
GCGCTCGAGG CGATCGACTC CGACGTCATC AAGACCTACG TGCGCCTGGG CCTGGGCGTG
GGCATCGTGG CCGAGATGGC GGTGCGCGAC GACCCGATCT GCGGCCCCGG CGGCGAGCTG
GTGGCCCGGC CGGTGGGGCA CCTGTTCGGC CCCAGCGTGG CGCGCATCGC CTTCAAGCGC
AGCGCCTACC TGCGTCACTT CGTCTATGCG TTTGCCGAGC TGCTGTCCGA GCGGCTGTCG
CGCGCCCTGA TCATGCGGGT GATGCAAGGC TCGACCGAAA GCGGCAACGC CGCCGACGCC
ATGTGA
|
|---|
| Protein sequence | MNLHQFRFVQ EAARRNLNLT ETAKALHTSQ PGISKAILEL EEELGVDIFV RHGKRLKRIT
EPGQQVLKSI EVIMREVVNL KRIGDDFSLQ DVGTLSIAAT HTQARYVLPA PVAALRSSYP
KVSVSLHQGT PDQVAQMVLD DAAEVGMATE RLMQYEDLVT LPCYEWRHVA VMPADHPLAL
VERISLEQLA HEPLISYHPS FTGRSKIDAA FEARNLKPQI ALEAIDSDVI KTYVRLGLGV
GIVAEMAVRD DPICGPGGEL VARPVGHLFG PSVARIAFKR SAYLRHFVYA FAELLSERLS
RALIMRVMQG STESGNAADA M
|
|---|
| |