| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2578 |
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| Symbol | |
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| ID | 6162255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2815038 |
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| End bp | 2816771 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665353 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001791608 |
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| Protein GI | 171059259 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000176794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCAGTTC CAGACCCGGA CATCCAAGCC TGCCGAGCCC TCGTCATCGA CGGCAACCCG
ACCTCGCGCA GCACGCTGGT GGCGATGCTG CGCGAGTTCG GCGTCGGCAC GGTGGCGCAA
TGCGCCCGGG CGATCGACGC GCGCCGCATC CTCGAACACC GCAATTTCGA CGTGGTGGTG
TGCGAGCACC ACTTCGACCA TCAGCACATG GGCGGCCAGG ATCTGCTCGA CGACCTGCGG
CGCGCCCAGC TGCTGCCGCT GTCGACCGTG TTCATCATGG TCACCGGCGA GGCCTCGTAC
GCCAAGGTGG CCGAGGCGGC CGAGTCGGCG CTCGACAGCT ACCTGCTCAA GCCGCACAAC
GCCACCGCGC TGCTCGATCG CGTGCTGCAG GCGCGCCGGC GCAAGCACAT GCTCAAGCCG
ATCTTCGACG CCATCGACGA AGGCCAGCTC GAGGTCGCGG CGCGGCTGTG CCAGCACCGC
TTCGAGGCAC GCGCCGAGTA CTGGCTATAC GCCGCGCGGG TGGGTGCCGA GCTGCTGCTG
CGCATGGGCC GCCACGACGA CGCCCGCGCG CTGTTCACCG CCATCCGCGA GACCCGCGCG
CTGCCCTGGG CCAAGCTGGG CATCGCACGC GCCGAGGTCG AGGCCGGCAC CACCGTGCAG
GCGCGCCGCA CGCTCGAATC GCTGATCAGC GACAACCCGA GCTTTGCCGA TGCCTACGAC
GTGATGGGCC GGGTGCAGGT CGAGCAGGGC GACCTCGAAG GCGCGCTGGC GACCTTCCGG
CGCGCCAGCG CGATCACGCC GGCCAGCGTC ACGCGGCTGC AGAAGCAGGG CATGCTGGCG
TTCTACGCCG GACAGTGGGA CGAAGCCGGC AAGGCGCTCG AACGCGCGAT GGTGACGGGC
CTGTCGAGCA AGATGTTCGA CATGCAGACG CTCGTCCTGC TGGCGCTGCT GCGCTTCGAC
CAAACCGACC CGCGCGGCCT GATCCGGGTC GGCGACAACC TGACGCGGGC GGTCGAGAAA
CACGGCGAAA GCGCCCGCCT GCGCCGCATG CTCGACCTGG TCACGGTGCT GCGCACGCTC
AACGAGCGGC AGATCGCGCG GGTGATCGAG CAGGTCAAGT CGATGGCCCG CGAGCTGAGC
GACGACGATT TCGATTTCGA GGCCGCCAGC AACACGGTCG CCCTGCTGAC GCGGCTGGCG
CGCACCGAGA TCCAGCTGGC CGACGCCGAG ATCTGGATCC GCACGCTGGC GCTGCGTTTC
TGCGTCTCGA AGGCCGGCAC CGACCTGCTG TCGGCCGCGG CGATCGGCCA TGACGGCTAC
CAGCAGATCA TCCGCGAGGC GCAGGTGCGC ATCGCCGCAC TGGCCGAGCG GGCGATGACG
CACAGCATCA AGGGCTCGCC CCTGATCGCG GTGCAGGCGC TGATCAGGCA GGGCCAGGAA
ACCCTCAACG CCAAGCTGCT CGAACTGGCC GGCCTGGTGC TGCAGCGGCA CCGCGAGCGG
ATTCCGGTCT ACGCGGAAAT GCTCGCCGAG GTGCGCGCGC TGCAGCAGCG CTACTGCGCC
AAGGGCACCC GCGTCAGCCT GAGCGACACC GGCCGCAGCG CCGGCGCGAT GGCGCTGCGC
ATGCAGACCG ACGCCCCCCA ACGCACGGTC GCGCGGCTGG ACGGCGGCGA TCAGGCGCTG
CCGTCGGCGG CCACCTCGCC GAGCCAGTCG GCCAGCACCT CGGCGGTGTC CTGA
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| Protein sequence | MSVPDPDIQA CRALVIDGNP TSRSTLVAML REFGVGTVAQ CARAIDARRI LEHRNFDVVV
CEHHFDHQHM GGQDLLDDLR RAQLLPLSTV FIMVTGEASY AKVAEAAESA LDSYLLKPHN
ATALLDRVLQ ARRRKHMLKP IFDAIDEGQL EVAARLCQHR FEARAEYWLY AARVGAELLL
RMGRHDDARA LFTAIRETRA LPWAKLGIAR AEVEAGTTVQ ARRTLESLIS DNPSFADAYD
VMGRVQVEQG DLEGALATFR RASAITPASV TRLQKQGMLA FYAGQWDEAG KALERAMVTG
LSSKMFDMQT LVLLALLRFD QTDPRGLIRV GDNLTRAVEK HGESARLRRM LDLVTVLRTL
NERQIARVIE QVKSMARELS DDDFDFEAAS NTVALLTRLA RTEIQLADAE IWIRTLALRF
CVSKAGTDLL SAAAIGHDGY QQIIREAQVR IAALAERAMT HSIKGSPLIA VQALIRQGQE
TLNAKLLELA GLVLQRHRER IPVYAEMLAE VRALQQRYCA KGTRVSLSDT GRSAGAMALR
MQTDAPQRTV ARLDGGDQAL PSAATSPSQS ASTSAVS
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