| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2554 |
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| Symbol | |
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| ID | 6163539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2787890 |
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| End bp | 2788315 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665329 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001791584 |
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| Protein GI | 171059235 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00133317 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACTTCC GCCCCCGCCG CCCCGAAGAG CCGGAGATCA ACCTGATCCC CTTCATCGAC
GTGCTGCTGG TCGTGCTGAT CTTCCTGATG CTGTCGACCA CCTACTCGCG CTTCACCGAG
CTGAAGGTCA CGCTGCCGGT GGCCGACGCC AACCAGCTCG ACAACCCGCC GCGCGAGATC
CTGGTGGCGG TCTCGGCCGA GGGCCGTTAC AGCGTCAACC GCCAACTGGT CGGCCAGCCG
GGCGTCGAAG GCCTGACGGC GGCGCTCAGC AACGCCGCGC AGGGTGACTT CAAGCGCCCG
CTGATCATCT CGGCCGATGC CATGGCAGCC CACCAGAGCG TGATCAACGT CATGGACGCG
GCCCGCCGGG TCGGCTTGAG CCAGCTCACG TTCGCGGCGC AGAACAGCCG CAGCCCGGCC
CGTTGA
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| Protein sequence | MNFRPRRPEE PEINLIPFID VLLVVLIFLM LSTTYSRFTE LKVTLPVADA NQLDNPPREI
LVAVSAEGRY SVNRQLVGQP GVEGLTAALS NAAQGDFKRP LIISADAMAA HQSVINVMDA
ARRVGLSQLT FAAQNSRSPA R
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