Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2545 |
Symbol | tig |
ID | 6162166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2775259 |
End bp | 2776566 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641665319 |
Product | trigger factor |
Protein accession | YP_001791575 |
Protein GI | 171059226 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0171608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTTA CCGTGGAGAC CCTCGACAAG CTCGAGCGCC GCATCACCCT GACGCTGTCG GCCGATGAAC TCAAGAACGA GGTCGAGTCG CGCCTGAAGA AGCTGGCCCG CACCACCAAG GCCGACGGCT TCCGCCCCGG CAAGGTGCCG ATGAGCGTCG TGGCCCAGCG CTACGGCTAT TCGGTGCAGT ACGAGGTCAT GAACGACAAG GTCGGTCAGG CCTTCGCAGC GGCCACCGGC GAGGCGCAGC TGCGCGTGGC CGGCACGCCG CGCATCACCG AGAAGGACGG CTCGGCCGAC GGCCAGGTCA GTTTCGACGC CACCTTCGAG GTCTATCCCG AAGTGACGAT CGGCGACCTG TCGGCGCTGG AAGTCGAGCG CGTCACGACC GAAGTCACCG ACGTCGCGAT CGACCGCACG CTCGACATCC TGCGCAAGCA GCGTCGCACC TTCGCCGACC GTCCGCAGGG CGAGTACGCG GTCGACGGTG ACCGCGTGAC GATCGACTTC GAAGGCAAGA TCGACGGCGA AACCTTCCAG GGCGGCAAGG CCGAGGCCTT CCAGTTCATC CTGGGCGAGG GCCGCATGCT CGAAGCCTTC GAGAAGGCCG TGCGCGGCAT GAAGACGGGC GAGTCGAAGA CCTTCCCGCT GGCCTTCCCG GCCGATTACC ACGGCGCTGA CGTGGCCGGC AAGGAAGCCG ACTTCCTGGT CACGCTGACC CGGATCGAAG CCCAGAATCT GCCTGAAGTC GACGCGGCCT TTGCCGAGTC GCTGGGCATC GCCGACGCGA CTGTCGACGG CCTGCGTGCC GACATCAAGA AGAACCTCGA GCGCGAGGTC AAGTTCCGCG TCGCCGCGCG CAACAAGCAG TCGGTCATGT CCGCCCTCGA GAAGGTCGCC ACCTTCGACC TGCCCAAGGC GCTGGTCGAC AACGAGATGG CTCGCCTGGT CGAGAACGCC CGTGCCGATC TGAAGCAGCG CGGCATTGCC GACGCCGACA AGGCACCGAT CCCGACCGAG ATGTTCCAGC CGCAAGCCGA GCGCCGCGTG CGCCTGGGCC TGACGATGGC CGAGCTGGTG CGTGCCAACG CGCTGTCGGC CACGATGGAG CAGATCAAGG CCCACATCGA CGAGATGGCG CAGAGCTACG AGAAGCCCGA AGAGGTCGTG CGCTGGTACT TCGGTGACCA GCAGCGCCTG TCCGAAGTCG AAGCCGTGGT GATCGAGGCC AATGTGGCCA ACTTCGTTCT CGGCCAGGCT CAGGTCGTCG ACAAGCAGCT GCCTTTCGAC GAACTGATGG GCGCCTGA
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Protein sequence | MAVTVETLDK LERRITLTLS ADELKNEVES RLKKLARTTK ADGFRPGKVP MSVVAQRYGY SVQYEVMNDK VGQAFAAATG EAQLRVAGTP RITEKDGSAD GQVSFDATFE VYPEVTIGDL SALEVERVTT EVTDVAIDRT LDILRKQRRT FADRPQGEYA VDGDRVTIDF EGKIDGETFQ GGKAEAFQFI LGEGRMLEAF EKAVRGMKTG ESKTFPLAFP ADYHGADVAG KEADFLVTLT RIEAQNLPEV DAAFAESLGI ADATVDGLRA DIKKNLEREV KFRVAARNKQ SVMSALEKVA TFDLPKALVD NEMARLVENA RADLKQRGIA DADKAPIPTE MFQPQAERRV RLGLTMAELV RANALSATME QIKAHIDEMA QSYEKPEEVV RWYFGDQQRL SEVEAVVIEA NVANFVLGQA QVVDKQLPFD ELMGA
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