| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2526 |
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| Symbol | |
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| ID | 6163981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2755096 |
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| End bp | 2755914 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665296 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001791556 |
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| Protein GI | 171059207 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0123409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA TGCAGTCGAT GCAGACTTTT CTCAGCACCA CCGTCAGCGA TCTGGCGGTG
AAGATCTTGG CCGCTGTCGC ATTCTGGATC GTCGGCCGCT GGCTGATCGG CCGAGTGATT
GCAGTCATGC AAGCGGCCAT GAACCGCAAT GCGGTCGATC CGACGCTGAC CAAGTACCTC
GGCTCGATCG TCGCGATCAC GCTGAACATC ACCCTGGTGC TCGGCATCCT GGGCTACTTC
GGCATCCAGA CCACCTCGTT TGCGGCCATG CTGGCCGGTG TGGGCGTGGC GATCGGCGCG
GCCTGGAGCG GCATGCTGGG CAACTTCGCC GCAGGTGCCT TCATGCTGGT GCTGCAGCCG
TTCAAGGTGG GGGATTTCGT CACCATCGGC GGCGTGACCG GCACGGTGCG CGAACTGGGC
CTGTTCGGCA CCACGCTGCT GACACCCGAC AACGTGCAGA CGATCGTCGG CAACGGCAAG
GCCTTCAGCG ACACGATCCA GAACTTCTCG TCCATGCCGG TGCGCCGCGT CGATCGCACC
GCACAGCTCG CCGGCAGCGT CGACCCGCTG GACGCGATCG CGCGCTTCAA GGCCGCCGTC
GCCCAGATCC CCAATGTGGC CACCAGCCCG GCCCCGGAGG TGAACCTGCT CGACTTCAAC
CTGGTCGGCT GCGTGATCTC GGTGCGTCCT TACACCCACA CCGACCACTA TTGGCAGGTC
TATTTCGACA CCAACGAAGC GATCGCCCGG GTCGCCAAGG AAGCCGGCTG GCCCGCGCCG
ACACCCAGCG CCATCCATCA CATCGTCCCG GCGGCCTGA
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| Protein sequence | MMDMQSMQTF LSTTVSDLAV KILAAVAFWI VGRWLIGRVI AVMQAAMNRN AVDPTLTKYL
GSIVAITLNI TLVLGILGYF GIQTTSFAAM LAGVGVAIGA AWSGMLGNFA AGAFMLVLQP
FKVGDFVTIG GVTGTVRELG LFGTTLLTPD NVQTIVGNGK AFSDTIQNFS SMPVRRVDRT
AQLAGSVDPL DAIARFKAAV AQIPNVATSP APEVNLLDFN LVGCVISVRP YTHTDHYWQV
YFDTNEAIAR VAKEAGWPAP TPSAIHHIVP AA
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