Gene Lcho_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2453 
Symbol 
ID6161646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2664055 
End bp2664858 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content72% 
IMG OID641665223 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001791483 
Protein GI171059134 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000878614 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACCG AACCCATCCT CTGCGAGATC CGCGGCCCCA TCGCGCTGCT GACGCTCAAC 
CGCCCCGACA CCCGCAACGC GCTCAGCGGC GAAGAGATGT TCGCCGCCTT CGAGCAGCTG
TTCGAGCGCC TCGACGCCGA CCTGTCCATC CGCGCCGCCG TACTGACCGG CGCCGGCAGC
GCCTTCTGCT CCGGCGGCAA CGTGGCCGAG ATGCGCGACC GCACCGGCAT GTTCGGCGGC
TCGCCCGAGC AGATCGCGGC CCACTACCGG GCCGGCATCC AGCGCATCCC ACGCGCCTTC
CAGCGCCTGC AGGTGCCGAT CATCGCGGCG GTCAACGGCG CGGCGATCGG CGCCGGCAAC
GACCTGGCGT GCATGTGCGA CATCCGCATC GCCGCCAGCA CGGCGCGGTT TGCCGAGAGC
TTCGTCAAGG TCGGCATCAT CCCGGGCGAC GGCGGCTGCT GGCTGCTGCC GCGCATCGTG
GGTGCCTCGC GCGCGGCCGA GCTGGCCTTG ACCGGCGACA GCATCGACGC GGCCGAGGCG
CTGCGCATCG GGCTGGTCTC GCGCGTGGTC GAACCCGCCG CGTTGATGGA CGAGGCGCTG
GCGCTGGCCG CTCGCATCGC CGCCAACCCG CCGCAGGTGC TGCGCTGGAC CAAGCAGCTG
CTGCAGCAGG CCCGCACCGG CACGCTCGAC GAGGCGCTCG ACGCCGCCGG CCAGCTGCAG
GGCCAGGCGC ACCACACCGC CGACCACGCC GAGGCCGTGA CGGCTTTCTT CGAAAAACGC
CCTCCGGTGT TCACCGGTCA TTGA
 
Protein sequence
MSTEPILCEI RGPIALLTLN RPDTRNALSG EEMFAAFEQL FERLDADLSI RAAVLTGAGS 
AFCSGGNVAE MRDRTGMFGG SPEQIAAHYR AGIQRIPRAF QRLQVPIIAA VNGAAIGAGN
DLACMCDIRI AASTARFAES FVKVGIIPGD GGCWLLPRIV GASRAAELAL TGDSIDAAEA
LRIGLVSRVV EPAALMDEAL ALAARIAANP PQVLRWTKQL LQQARTGTLD EALDAAGQLQ
GQAHHTADHA EAVTAFFEKR PPVFTGH