| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2452 |
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| Symbol | |
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| ID | 6161645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2662846 |
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| End bp | 2663979 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665222 |
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| Product | response regulator receiver modulated metal dependent phosphohydrolase |
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| Protein accession | YP_001791482 |
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| Protein GI | 171059133 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00101758 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAATCG CCGTACCCCA GCCCGCACCG CCGTCCGGAA CCATCCTGAT CGTCGACGAC
ATGCCGACCA ACCTGGCCGT GATCGGCGCG CTGCTGCAGG CCAACGGCTA CCGCGTGCTG
GCGGCGCAGA GCGGCGAGGC GGCGTTGCGC TACGCGGCGC GCAGCCCGGC GCCCGACCTG
GTGCTGCTCG ATGTCGTGAT GCCGACGATG GACGGCTACG AAGTGCTGCG CCGCCTGCGC
GAGGAGCCCG CCACCGCGCT GCTGCCGGTG GTGTTCCTGA CCGTGCTGGG CGAGCCGTCG
GACGAGGAGC TCGGGCTGTC GCTGGGCGCG GCCGACTACA TCTCCAAACC GATCCAGCCG
GCCATCGTGC TGGCGCGCGT GCGCACCCAG ATCGATGCCG CCCGCGCCCG CGAACTGCTG
CGCAACCACA ACGCCTGGCT CGAGGCCGAG GTGGTCCGCC GGATGGCGCA GAACGAGCTG
ACGCAGACCG TCAGCATCCG CGCGCTGGCG CATCTGGCCG AAATCCGCGA CCCCGAAACC
GGCAACCACA TCCTGCGCAC GCAGGCCTAC GTGCTGGCGC TGGCCACCGA ACTGCGCAAC
CACCCGCGCC ACCGCACGCT GCTCACCGAA CGATTCGTGG CGCTGCTGGC GCGCTCGGCG
CCGCTGCACG ACATCGGCAA GGTCGGCATC CCCGACCGCG TGCTGCTGCA TCCGGGCCGG
CTCCACGGCG AGGACTGGGA GATCATGAAG ACCCACGCCG CCATCGGCGC GCGCGCCATC
GAGCTGGCCG AGCTGGACAC CGAGCAGGAG GTCGATTTCC TGAGCGTGGC CAAGGAGATC
GCACGCTGGC ACCACGAGCA CTGGGACGGC AGCGGCTACC CCGACGGCCT GCAGGGCGAG
GCCATCCCGC TGTCGGCGCG GCTGATGGCG CTGGCCGACG TGTTCGACGC GCTGATCACG
CCGCGTGTCT ACAAGGAGCC GATGAGCGGC GAGCAGGCCC GCGAGCTGAT CCGGGCCGGC
CGCGGCAGCC ATTTCGACCC CGATGTCGTC GACGCCTTCG AGCGCCAGTT CGACGCCTTC
TGCGCCATCG CCGACCGCTA CGCCGACGCC GGCTGGCGGG TGCGCGCGGC CTGA
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| Protein sequence | MQIAVPQPAP PSGTILIVDD MPTNLAVIGA LLQANGYRVL AAQSGEAALR YAARSPAPDL
VLLDVVMPTM DGYEVLRRLR EEPATALLPV VFLTVLGEPS DEELGLSLGA ADYISKPIQP
AIVLARVRTQ IDAARARELL RNHNAWLEAE VVRRMAQNEL TQTVSIRALA HLAEIRDPET
GNHILRTQAY VLALATELRN HPRHRTLLTE RFVALLARSA PLHDIGKVGI PDRVLLHPGR
LHGEDWEIMK THAAIGARAI ELAELDTEQE VDFLSVAKEI ARWHHEHWDG SGYPDGLQGE
AIPLSARLMA LADVFDALIT PRVYKEPMSG EQARELIRAG RGSHFDPDVV DAFERQFDAF
CAIADRYADA GWRVRAA
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