Gene Lcho_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2435 
Symbol 
ID6163641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2644754 
End bp2645467 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content73% 
IMG OID641665205 
Producthypothetical protein 
Protein accessionYP_001791465 
Protein GI171059116 
COG category[R] General function prediction only 
COG ID[COG3897] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.77423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGTT ACCAGATCAA GCTCGAGGAC GTCGCCATCG GCGGCGTCGC CGACGTGCAC 
ATCCGTTGCC TGCTGGACCG CCAGCAATAC GCCGATCCGC TCGGCGCAGC CGCCGCGCTG 
GGCATCTCGT CGGCGGCCTG GCCGCTGTTC GGCATGGTCT GGCCGTCGGG GCTGCAACTG 
GCGGCGGCGG TGGCGCAGCG GCCGGTGCGG GCCGACGAGC GCATCCTCGA GATCGGCTGC 
GGCCTGGCGC TGGCCAGCCT GATCTGCCAT CGGCGCGGCT CGCAGGTCAC GGCCAGCGAC 
TGCCATCCGC TGGCCGGCGA GTTCCTGCGC CAGAACCTGC TGCTCAACCA CCTGCCGCCG 
CTGCCCTATC GCCACGGCGA CTGGGGCGCG CCGCAGGAGG CCGACCTGGC ACCCACCTGC 
GCGCAGGGCC CGCGCCTGCA GGGCCGCTAC GAGCTGATCA TCGGCAGCGA CGTGCTCTAC 
GAGCGCGACG ACGCCGGCGT GCTGCCGCAG TTCATCGCCC GCCATGCCGC CGCGGTGGGC 
GAGGTGCTGA TCGTCGACCC GAACCGCGGC AACCGCTCGC CCTTCCATCG GCGCATGCAG 
GCGATGGGCT ACACGCTGCA GGAAACCCGC CTGCTGGCAC CGGCGGATGC GGCCGGCGCC 
ATCTATCGGG GCCGGCTGCT GCACTACCGG CGCGGCCTGA TCGCCGCCCA TTGA
 
Protein sequence
MPGYQIKLED VAIGGVADVH IRCLLDRQQY ADPLGAAAAL GISSAAWPLF GMVWPSGLQL 
AAAVAQRPVR ADERILEIGC GLALASLICH RRGSQVTASD CHPLAGEFLR QNLLLNHLPP 
LPYRHGDWGA PQEADLAPTC AQGPRLQGRY ELIIGSDVLY ERDDAGVLPQ FIARHAAAVG 
EVLIVDPNRG NRSPFHRRMQ AMGYTLQETR LLAPADAAGA IYRGRLLHYR RGLIAAH