| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2430 |
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| Symbol | |
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| ID | 6161011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2638559 |
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| End bp | 2640445 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665200 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001791460 |
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| Protein GI | 171059111 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.579261 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCC CCGACAAGCT GCAAGACCTG CTCTCGCTGA CCCGCGAACC CTTCCCCGCC
TCGCGCAAGG TCTACGCCGA GGGCTCCGAG GGCGTGCGCG TGCCGATGCG CGAGATCGCG
CTGACCAACG GCGAGCGCGT CACGGTCTAC GACACCTCCG GCCCCTACAC CGATCCGCTC
GCGACGATCG ACGCCAAGCT CGGCCTGCCG AGCGTGCGCA CCGGCTGGAT CGAGGCCCGC
GGCGACACCG AGACCTACGC CGGCCGCAAC CGCGTGGCGC TGGACGACGG CGGCAAGCAC
GAGGAAACGG CGCGCATCGA AGCCCTGCGC GCCCAGGCCG CCGCGCTGCA GCGCACGCCG
CGCCGCGCCA AGGCTGGCGG CAACGTGACG CAGATGCACT ACGCCCGCCG CGGCATCGTC
ACGCCCGAGA TGGAGTACGT GGCGATCCGC GAAAACGGCA AGCGCGAATG GATGCGCGAG
TACCTGGGCG ACGCCGAGCG CGAGGCCCGC CTGGCCGGCA ATGCCAAGGG CGCGCGCATC
CCCGAGATCT ACACGCCCGA GTTCGTGCGC GACGAGGTGG CGCGCGGGCG CGCGATCATC
CCGGCCAACA TCAACCACCC CGAGGTGGAA CCGATGGCGA TCGGGCGCAA CTTCGGCGTC
AAGATCAACG CCAACATCGG CAACTCGGCG GTGACGTCGA GCATCGAGGA AGAAGTCGAG
AAACTCGTGT GGGCGATCCG CTGGGGCGCC GACAACGTGA TGGACCTGTC GACCGGCCGC
AACATCCACA CCACGCGCGA CTGGATCGTG CGCAACAGCC CCGTGCCCAT CGGCACCGTG
CCGATCTACC AGGCGCTCGA GAAGGTCGGC GGCATCGCCG AAGACCTGAC CTGGGCGATC
TACCGCGACA CGCTGATCGA GCAGGCCGAA CAGGGCGTCG ACTACTTCAC CATCCACGCG
GGGGTGCGCC TGCCGTTCAT CCACCTGACG GCGAATCGGC GCACCGGCAT CGTCTCGCGC
GGCGGCTCGA TCCTGGCCAA GTGGTGCATC ACGCATCACA AGGAAAACTT CCTGTACACG
CACTTCGAAG AGATCTGCGA AATCATGAAG GCCTACGACG TCAGCTTCTC GCTCGGCGAC
GGCCTGCGTC CGGGCTCGGC GTCCGACGCC AACGACGCGG CGCAGTTCGC CGAGCTGAAG
ACGCTGGGCG AGCTGACGCA GGTGGCCTGG AAACACGACG TACAGACCAT GATCGAAGGC
CCCGGCCACG TGCCGATGCA CCTGATCCAG GCCAACATGG ACGAGCAGAT CAAGCACTGC
CACGAGGCGC CGTTCTACAC GCTCGGGCCC TTGACGATCG ACATCGCACC CGGCTACGAC
CACATTGCGT CAGCGATCGG CGCAGCCATG ATCGGCTGGA TGGGCACGGC GATGCTGTGC
TACGTGACGC CCAAGGAGCA CCTCGGCCTG CCCGACCGCG ACGACGTCAA GCAGGGCATC
ATTGCCTACA AGATCGCCGC GCACGCGGCC GACATCGCCA AGGGCCACCC GGGTGCACGG
GCCCGTGACG ACGCGATGAG CAAGGCGCGC TTCGAGTTCC GCTGGCACGA CCAGTTCAAC
CTCGGCCTCG ACCCCGACAC GGCGCGCGAC TATCACGACG AGACGCTGCC GAAGGACTCC
AGCAAGGAAG CGCATTTCTG CAGCATGTGC GGGCCGAAGT TCTGCTCGAT GAAGATCACG
CAGGACGTGC GCGACTACGC CGCGGCCAAG GGCTTGAGCG AGGAGCAGGC GCTGGCCGAC
GTCGAACAAG GCATGGCGGC CAAGTCGGCC GAGTTCAAGG CGCAGGGCGG CGAGCTCTAC
ATCCCGATCA CGCCGGTGCA GGCCTGA
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| Protein sequence | MNAPDKLQDL LSLTREPFPA SRKVYAEGSE GVRVPMREIA LTNGERVTVY DTSGPYTDPL
ATIDAKLGLP SVRTGWIEAR GDTETYAGRN RVALDDGGKH EETARIEALR AQAAALQRTP
RRAKAGGNVT QMHYARRGIV TPEMEYVAIR ENGKREWMRE YLGDAEREAR LAGNAKGARI
PEIYTPEFVR DEVARGRAII PANINHPEVE PMAIGRNFGV KINANIGNSA VTSSIEEEVE
KLVWAIRWGA DNVMDLSTGR NIHTTRDWIV RNSPVPIGTV PIYQALEKVG GIAEDLTWAI
YRDTLIEQAE QGVDYFTIHA GVRLPFIHLT ANRRTGIVSR GGSILAKWCI THHKENFLYT
HFEEICEIMK AYDVSFSLGD GLRPGSASDA NDAAQFAELK TLGELTQVAW KHDVQTMIEG
PGHVPMHLIQ ANMDEQIKHC HEAPFYTLGP LTIDIAPGYD HIASAIGAAM IGWMGTAMLC
YVTPKEHLGL PDRDDVKQGI IAYKIAAHAA DIAKGHPGAR ARDDAMSKAR FEFRWHDQFN
LGLDPDTARD YHDETLPKDS SKEAHFCSMC GPKFCSMKIT QDVRDYAAAK GLSEEQALAD
VEQGMAAKSA EFKAQGGELY IPITPVQA
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