| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2400 |
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| Symbol | |
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| ID | 6161412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2606211 |
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| End bp | 2607950 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665170 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001791430 |
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| Protein GI | 171059081 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.927411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC CGCAGATCGA CATCCGCGAC GTCCCGCCGC GCGCCGCCTG GGCGCTGGAG
CAGGCCGGCG TTCACCCGCT GCTGGCGCGC CTGTACGCGG CGCGCGGCAT CCGCACGCCG
TCCGAACTCG ACGACGGCCT GGCGCGCCTG ATCCCGCCCA CCGAACTGCT CGGCGCCGAC
GCCGCTGCGC GCCTGCTGGC CGACGCGCTG CAGGCCGGCG AGCGCATCGT CATCGTGGCC
GACTACGACT GCGACGGCGC CACCGCCTGC GCCGTCGCGC TGCGTGGCCT GGCGATGCTG
GGCGCCCGCC CCGGCACGCT GCAGCATGTG GTGCCCGACC GCGCGGTGCA CGGCTACGGC
CTGACGCCGA CCATCGTCGA CCTGGCGCTG GCCCGCCCGG CGCACGAGCG CCCGAGCGTG
CTGGTGACAG TCGACAACGG CATCGCCAGC CACGCCGGCG TGGCGCACGC GCAAGCGCTG
GGCATGAAGG TGCTCGTCAC CGACCACCAC CTGCCCGCGG CCGACGCCAA CGGCGCGGTG
ACGCTGCCCA CGGCCGACGT GATCGTCAAC CCCAACCAGC CCGGCTGCGC GTTCGAGAGC
AAGGCGCTGG CCGGGGTCGG CGTGATGTTC TACGTGCTGC TGGCGCTGCG CGCGGAGTTG
CGTGCACGGG GTGCCTTCGA TGCCGCGAAT CAGCCACGGC TCGATGCGCT GCTCGACCTG
GTCGCGCTCG GCACCGTGGC CGACGTGGTG CGGCTCGACG CCAACAACCG CCGGCTGGTC
GCGCAGGGCC TGAAACGCAT CCGCAGCGGG CGCATGCAGG CGGGCGTGGC GGCGCTGTTC
GTGGCCGCCG GGCGTGATCC GATGAAAGCC AGCGGCTTCG ACTTCGGCTT CGCGCTCGGC
CCACGACTGA ACGCCGCCGG GCGCCTGGCC GACATGGGCC TGGGCATCGC CTGCCTGCTG
AGCGACGACC CGGGCCACGC CACCGAACTG GCGCAGCAGC TCGACGCCAT CAACCGCCAG
CGCCGCGAGG TCGAAAGCGG CATGAAGGAG CAGGCCGAGG TGCTGCTGGA GCGCCTGATG
CCCGCCGGCG AGCCGCCGCC GGCGCTGTCG CTCTACGACC CCGAGTTTCA TGAAGGCGTG
GTCGGCATCG TCGCCGGCCG GCTGAAGGAG CGGCTGCACC GGCCGACCTT CGTGTTCGCA
CGCGGGGCCG ACGGCCACCT CAAGGGCTCG GGCCGCTCGA TCCCGGGATT TCACCTGCGC
GACGCACTCG ACCTGGTCGC CAAGCGCCAC CCCGAGGTGC TCAAGAAGTT CGGCGGCCAC
GCGATGGCGG CCGGCTGCAC GATCGACGAG GCCGACTTCG CCACCTTCGA TGTCGCGCTG
CAGCGGGTCG CCACCGAATG GCTGTCACCG GCCGCGCTGC AGCGCCGCCT GGCCACCGAC
GGCCCGCTGG AACGGCAGTG GTTCGACACC GACGTGGTGC AGCTGCTCGA CGCGGCGGTC
TGGGGCCAGG CCTTCGAGGC GCCGCTGTTC ACCGACGAGG TCGACGTGGT GAGCCAGCGC
CTGGTCGGCG AAAAGCACAT GAAGCTCAGC GTGCGCCACG CCGGTCAACT GCGCGAGGCG
ATCTGGTTCG GCCACACCGA GGCCCTGCCC GCGCGCGTTC GGCTGGCCTA CCGGCTCAGC
CTGGACGAAT ACCAGGGCCG CAAGCGCGTG CAGATGGTGG TGGAAGCAGC GGCGGCCTGA
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| Protein sequence | MSTPQIDIRD VPPRAAWALE QAGVHPLLAR LYAARGIRTP SELDDGLARL IPPTELLGAD
AAARLLADAL QAGERIVIVA DYDCDGATAC AVALRGLAML GARPGTLQHV VPDRAVHGYG
LTPTIVDLAL ARPAHERPSV LVTVDNGIAS HAGVAHAQAL GMKVLVTDHH LPAADANGAV
TLPTADVIVN PNQPGCAFES KALAGVGVMF YVLLALRAEL RARGAFDAAN QPRLDALLDL
VALGTVADVV RLDANNRRLV AQGLKRIRSG RMQAGVAALF VAAGRDPMKA SGFDFGFALG
PRLNAAGRLA DMGLGIACLL SDDPGHATEL AQQLDAINRQ RREVESGMKE QAEVLLERLM
PAGEPPPALS LYDPEFHEGV VGIVAGRLKE RLHRPTFVFA RGADGHLKGS GRSIPGFHLR
DALDLVAKRH PEVLKKFGGH AMAAGCTIDE ADFATFDVAL QRVATEWLSP AALQRRLATD
GPLERQWFDT DVVQLLDAAV WGQAFEAPLF TDEVDVVSQR LVGEKHMKLS VRHAGQLREA
IWFGHTEALP ARVRLAYRLS LDEYQGRKRV QMVVEAAAA
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