Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2362 |
Symbol | |
ID | 6159750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2565641 |
End bp | 2566807 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641665131 |
Product | hypothetical protein |
Protein accession | YP_001791392 |
Protein GI | 171059043 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAGCA ACGACAACGT GTTTCATCGG CCGAAGTACG CCGAGGAGAT GGCCGAGCAG TTGCTGCACC CGACTGCGCT GCAGCAGAGC GTGCGCTCCG GTGTCTTTCT CTCGGGCATC CGACGCGTGG GCAAGACGAC CTTCCTGCGC CAGGATCTGA TACCGGCGCT CGAGGCGCGT GGCGCCATCG TCATTTACGT GGACTTGTGG ACCGACGTGT CCAAGAGCCC GGCGGCACTC GTGCACGAGG CTGTCCGCCA CACCTTGGCG CAGTTGGAGG CACCTGGCTC GGGGCTGCTC AAGCGCTTGA AGGGCATGAA CATCGGCGCC GCGGGCTTCT CTCTGGGTTT CCAGATCGAC AGTGTGGGCG CCCCGGGCGG CACCACGCTG GCCCAGGCTT TTGCGACGCT CGTGGCCAAG GTCGAGACCG ACGTCGTGCT GATCGTTGAC GAAGTGCAGC AGACGCTGTC CTCGGAGGAC GGCAAGAACC TGATGCATGC GTTGAAAGCG GCGCGCGACG CGGTCAACGC CAAGCCCGGC ACGCCCGGGT ATTTCCTGTT CCTCGGCACG GGCTCGCACA AGTCGCTGGT CACTGACATG GCCTCGCGTC GCTCGCAGCC CTTTACCGGC GCGGTGTCGA CCTACTACGA GGTTCTGGGC CAGGACTTCG TCGAGTGGCA GTTGCAACGC GTGAGCGTGA CGCCCGGCGC CAAGGTGCCG AGCCTGGCTG TGGCAGTCGC GTGTTTCCAG GCCATGGGCA GCCGGCCGGA AGAGTTGCTC AAGGCGCTCA GGCAGTTGCA GGGCATCAAC ACCCTGCGGC CCGACCAGGC GTTTCCGGTC ATCTGCGACA CGCTGGCCTC GGCGGCGGCG GACATCGAGC TTCGTGCCAT CGAGGATTTC GGCGAACTGG GCAAGCTGAT CTTCGGGCGC ATCGCGGCCG GCAGTGAAGA AGGTGTCTCG GGGCTGTTCA GTGCAGACGC CCTGGCTGAA TACAGCCGCA GCGTCGGCAC CTCGGTCGAC GCGCCGCAGG TGCAAGGCAT CACCGACAAG ATGATCGCGG CCAACCTCAT CACCCGACCG GGGCACGGCG TGTACACGGT GGCAGACCCG TTTGTGCGCA GCGTCTGGCG CAAACGCAGC GAAACCTTGG CGGGACCGGC AGCCTGA
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Protein sequence | MLSNDNVFHR PKYAEEMAEQ LLHPTALQQS VRSGVFLSGI RRVGKTTFLR QDLIPALEAR GAIVIYVDLW TDVSKSPAAL VHEAVRHTLA QLEAPGSGLL KRLKGMNIGA AGFSLGFQID SVGAPGGTTL AQAFATLVAK VETDVVLIVD EVQQTLSSED GKNLMHALKA ARDAVNAKPG TPGYFLFLGT GSHKSLVTDM ASRRSQPFTG AVSTYYEVLG QDFVEWQLQR VSVTPGAKVP SLAVAVACFQ AMGSRPEELL KALRQLQGIN TLRPDQAFPV ICDTLASAAA DIELRAIEDF GELGKLIFGR IAAGSEEGVS GLFSADALAE YSRSVGTSVD APQVQGITDK MIAANLITRP GHGVYTVADP FVRSVWRKRS ETLAGPAA
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