Gene Lcho_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2362 
Symbol 
ID6159750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2565641 
End bp2566807 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content66% 
IMG OID641665131 
Producthypothetical protein 
Protein accessionYP_001791392 
Protein GI171059043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCA ACGACAACGT GTTTCATCGG CCGAAGTACG CCGAGGAGAT GGCCGAGCAG 
TTGCTGCACC CGACTGCGCT GCAGCAGAGC GTGCGCTCCG GTGTCTTTCT CTCGGGCATC
CGACGCGTGG GCAAGACGAC CTTCCTGCGC CAGGATCTGA TACCGGCGCT CGAGGCGCGT
GGCGCCATCG TCATTTACGT GGACTTGTGG ACCGACGTGT CCAAGAGCCC GGCGGCACTC
GTGCACGAGG CTGTCCGCCA CACCTTGGCG CAGTTGGAGG CACCTGGCTC GGGGCTGCTC
AAGCGCTTGA AGGGCATGAA CATCGGCGCC GCGGGCTTCT CTCTGGGTTT CCAGATCGAC
AGTGTGGGCG CCCCGGGCGG CACCACGCTG GCCCAGGCTT TTGCGACGCT CGTGGCCAAG
GTCGAGACCG ACGTCGTGCT GATCGTTGAC GAAGTGCAGC AGACGCTGTC CTCGGAGGAC
GGCAAGAACC TGATGCATGC GTTGAAAGCG GCGCGCGACG CGGTCAACGC CAAGCCCGGC
ACGCCCGGGT ATTTCCTGTT CCTCGGCACG GGCTCGCACA AGTCGCTGGT CACTGACATG
GCCTCGCGTC GCTCGCAGCC CTTTACCGGC GCGGTGTCGA CCTACTACGA GGTTCTGGGC
CAGGACTTCG TCGAGTGGCA GTTGCAACGC GTGAGCGTGA CGCCCGGCGC CAAGGTGCCG
AGCCTGGCTG TGGCAGTCGC GTGTTTCCAG GCCATGGGCA GCCGGCCGGA AGAGTTGCTC
AAGGCGCTCA GGCAGTTGCA GGGCATCAAC ACCCTGCGGC CCGACCAGGC GTTTCCGGTC
ATCTGCGACA CGCTGGCCTC GGCGGCGGCG GACATCGAGC TTCGTGCCAT CGAGGATTTC
GGCGAACTGG GCAAGCTGAT CTTCGGGCGC ATCGCGGCCG GCAGTGAAGA AGGTGTCTCG
GGGCTGTTCA GTGCAGACGC CCTGGCTGAA TACAGCCGCA GCGTCGGCAC CTCGGTCGAC
GCGCCGCAGG TGCAAGGCAT CACCGACAAG ATGATCGCGG CCAACCTCAT CACCCGACCG
GGGCACGGCG TGTACACGGT GGCAGACCCG TTTGTGCGCA GCGTCTGGCG CAAACGCAGC
GAAACCTTGG CGGGACCGGC AGCCTGA
 
Protein sequence
MLSNDNVFHR PKYAEEMAEQ LLHPTALQQS VRSGVFLSGI RRVGKTTFLR QDLIPALEAR 
GAIVIYVDLW TDVSKSPAAL VHEAVRHTLA QLEAPGSGLL KRLKGMNIGA AGFSLGFQID
SVGAPGGTTL AQAFATLVAK VETDVVLIVD EVQQTLSSED GKNLMHALKA ARDAVNAKPG
TPGYFLFLGT GSHKSLVTDM ASRRSQPFTG AVSTYYEVLG QDFVEWQLQR VSVTPGAKVP
SLAVAVACFQ AMGSRPEELL KALRQLQGIN TLRPDQAFPV ICDTLASAAA DIELRAIEDF
GELGKLIFGR IAAGSEEGVS GLFSADALAE YSRSVGTSVD APQVQGITDK MIAANLITRP
GHGVYTVADP FVRSVWRKRS ETLAGPAA