Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2319 |
Symbol | |
ID | 6161940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2518343 |
End bp | 2519833 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641665088 |
Product | undecaprenyl-phosphate glucose phosphotransferase |
Protein accession | YP_001791349 |
Protein GI | 171059000 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGC AACCCAGCGC AGCGGCGTCT CTACCGAGCC CTGCCAAACC TGACCATGGC AACGCCGTGC GGCAGATCTC CCCCGCCTGG CAACTCGGCA ACGCGATGCT GGGTGCGCGC GGCTTCGCAC CCACGCCGCC GCAGTCGATC TCGAGCTTCG TGGCCGGCAT CGCCGAGCCG ATGGTGTCGG TGCTGGCCCT GATGCTGTGC ACCCTGGCGT TCGACGAACC GATCGACCGC GCCACCGAAC TGCTGGCCCT GGTCGTCATG GTGCTGACCT TCCCCGGCGC CAACCGCTTT CATTCATCGC CGGCGACCGC GGCGAGCGGC ATCGTCGGCT CGTGGATCAC CGTCACCTGC GTGCTGCTGC TGGTCGGCTA TGCGACCGAC ACCTACAAGT TCTTCAACAC CGAGGCGGTC ACGCTCTGGC TGGTGGTCTC TCCGCTGCTG CACGGCCTGG TGGCCGCGAC CGGCCACATC TGGCTGCGCC AGCGCGCACG CAAAGAACAC GCCCGGCGGC GCGCCCTCGT GATCGGCGCC GGCGAGCTGG GCGTGCGGGT GGCCAACATG CTGCGCCAGC GCAGCGCGGT CGGCCACGAC TTCATCGGCT TCGTCGAAGA CCGCGACCTC GAACGCTGCC CGGCGAGCGC TCGCCACGAC GTCATCGGCA GCATGCAGCA GGTGCAGGAC ATCATCCGCG AGCGCGGCAT CCGCGACGCC TACATCACCC TGCCGCTGGG CAGCCAGCCG CGCATCTCGC GGCTCGTCAG TGCGCTGCAG GATTCGGCTG CCACGCTCTA TTTCGTGCCC GACGTGTTCG GCGTCAACGT CATCCAGGGC CGCATGCGCA ACCTCGACGG CGTGCCGGTG GTCGGTCTGC TCGAAAGCCC GTTCATCGGC ACCAACGCGC TGCTCAAGCG CGCCAGCGAC ATCGTGATCT CCAGCCTGAT CCTGGTCCTG ATCGCGCCGA TCATGCTGGC CATCGCGATC GGCATCAAAC GCACGTCCCC CGGCCCGGTG ATCTTCAAGC AGCGCCGCCA CGGCCTGGAC GGGCGCGAGA TCGTGGTCTA CAAGTTCCGC TCGATGACCA CGCAGGACAA CGGCCCGGTG GTGCAGCAGG CCACCCGCAA CGATCCGCGC GTGACGCCGT TCGGCGCCTT CCTGCGCCGC ACCTCGCTCG ACGAACTGCC GCAGTTCATC AACGTGCTGC AAGGGCGCAT GAGCATCGTC GGCCCGCGCC CCCACGCGCT GGCGCACAAC GAGCAGTACC GCGAGCTGAT CAAGGCCTAC ATGGTGCGCC ACAAGGTGCG CCCGGGCATC ACCGGCTGGG CCCAGGTCAA CGGCAGCCGC GGCGAAACCG ACACCACCGA CAAGATGGCC GAGCGCGTGC GGCTCGACAT CGAGTACCTG CGCAACTGGA GCCTCGGCCT CGACCTGCGC ATCATCGCGC GCACCGCCGG CCTGACGCTG TTCGACCGCA ACGCGTACTG A
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Protein sequence | MTAQPSAAAS LPSPAKPDHG NAVRQISPAW QLGNAMLGAR GFAPTPPQSI SSFVAGIAEP MVSVLALMLC TLAFDEPIDR ATELLALVVM VLTFPGANRF HSSPATAASG IVGSWITVTC VLLLVGYATD TYKFFNTEAV TLWLVVSPLL HGLVAATGHI WLRQRARKEH ARRRALVIGA GELGVRVANM LRQRSAVGHD FIGFVEDRDL ERCPASARHD VIGSMQQVQD IIRERGIRDA YITLPLGSQP RISRLVSALQ DSAATLYFVP DVFGVNVIQG RMRNLDGVPV VGLLESPFIG TNALLKRASD IVISSLILVL IAPIMLAIAI GIKRTSPGPV IFKQRRHGLD GREIVVYKFR SMTTQDNGPV VQQATRNDPR VTPFGAFLRR TSLDELPQFI NVLQGRMSIV GPRPHALAHN EQYRELIKAY MVRHKVRPGI TGWAQVNGSR GETDTTDKMA ERVRLDIEYL RNWSLGLDLR IIARTAGLTL FDRNAY
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