Gene Lcho_2319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2319 
Symbol 
ID6161940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2518343 
End bp2519833 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content69% 
IMG OID641665088 
Productundecaprenyl-phosphate glucose phosphotransferase 
Protein accessionYP_001791349 
Protein GI171059000 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC AACCCAGCGC AGCGGCGTCT CTACCGAGCC CTGCCAAACC TGACCATGGC 
AACGCCGTGC GGCAGATCTC CCCCGCCTGG CAACTCGGCA ACGCGATGCT GGGTGCGCGC
GGCTTCGCAC CCACGCCGCC GCAGTCGATC TCGAGCTTCG TGGCCGGCAT CGCCGAGCCG
ATGGTGTCGG TGCTGGCCCT GATGCTGTGC ACCCTGGCGT TCGACGAACC GATCGACCGC
GCCACCGAAC TGCTGGCCCT GGTCGTCATG GTGCTGACCT TCCCCGGCGC CAACCGCTTT
CATTCATCGC CGGCGACCGC GGCGAGCGGC ATCGTCGGCT CGTGGATCAC CGTCACCTGC
GTGCTGCTGC TGGTCGGCTA TGCGACCGAC ACCTACAAGT TCTTCAACAC CGAGGCGGTC
ACGCTCTGGC TGGTGGTCTC TCCGCTGCTG CACGGCCTGG TGGCCGCGAC CGGCCACATC
TGGCTGCGCC AGCGCGCACG CAAAGAACAC GCCCGGCGGC GCGCCCTCGT GATCGGCGCC
GGCGAGCTGG GCGTGCGGGT GGCCAACATG CTGCGCCAGC GCAGCGCGGT CGGCCACGAC
TTCATCGGCT TCGTCGAAGA CCGCGACCTC GAACGCTGCC CGGCGAGCGC TCGCCACGAC
GTCATCGGCA GCATGCAGCA GGTGCAGGAC ATCATCCGCG AGCGCGGCAT CCGCGACGCC
TACATCACCC TGCCGCTGGG CAGCCAGCCG CGCATCTCGC GGCTCGTCAG TGCGCTGCAG
GATTCGGCTG CCACGCTCTA TTTCGTGCCC GACGTGTTCG GCGTCAACGT CATCCAGGGC
CGCATGCGCA ACCTCGACGG CGTGCCGGTG GTCGGTCTGC TCGAAAGCCC GTTCATCGGC
ACCAACGCGC TGCTCAAGCG CGCCAGCGAC ATCGTGATCT CCAGCCTGAT CCTGGTCCTG
ATCGCGCCGA TCATGCTGGC CATCGCGATC GGCATCAAAC GCACGTCCCC CGGCCCGGTG
ATCTTCAAGC AGCGCCGCCA CGGCCTGGAC GGGCGCGAGA TCGTGGTCTA CAAGTTCCGC
TCGATGACCA CGCAGGACAA CGGCCCGGTG GTGCAGCAGG CCACCCGCAA CGATCCGCGC
GTGACGCCGT TCGGCGCCTT CCTGCGCCGC ACCTCGCTCG ACGAACTGCC GCAGTTCATC
AACGTGCTGC AAGGGCGCAT GAGCATCGTC GGCCCGCGCC CCCACGCGCT GGCGCACAAC
GAGCAGTACC GCGAGCTGAT CAAGGCCTAC ATGGTGCGCC ACAAGGTGCG CCCGGGCATC
ACCGGCTGGG CCCAGGTCAA CGGCAGCCGC GGCGAAACCG ACACCACCGA CAAGATGGCC
GAGCGCGTGC GGCTCGACAT CGAGTACCTG CGCAACTGGA GCCTCGGCCT CGACCTGCGC
ATCATCGCGC GCACCGCCGG CCTGACGCTG TTCGACCGCA ACGCGTACTG A
 
Protein sequence
MTAQPSAAAS LPSPAKPDHG NAVRQISPAW QLGNAMLGAR GFAPTPPQSI SSFVAGIAEP 
MVSVLALMLC TLAFDEPIDR ATELLALVVM VLTFPGANRF HSSPATAASG IVGSWITVTC
VLLLVGYATD TYKFFNTEAV TLWLVVSPLL HGLVAATGHI WLRQRARKEH ARRRALVIGA
GELGVRVANM LRQRSAVGHD FIGFVEDRDL ERCPASARHD VIGSMQQVQD IIRERGIRDA
YITLPLGSQP RISRLVSALQ DSAATLYFVP DVFGVNVIQG RMRNLDGVPV VGLLESPFIG
TNALLKRASD IVISSLILVL IAPIMLAIAI GIKRTSPGPV IFKQRRHGLD GREIVVYKFR
SMTTQDNGPV VQQATRNDPR VTPFGAFLRR TSLDELPQFI NVLQGRMSIV GPRPHALAHN
EQYRELIKAY MVRHKVRPGI TGWAQVNGSR GETDTTDKMA ERVRLDIEYL RNWSLGLDLR
IIARTAGLTL FDRNAY