Gene Lcho_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2307 
Symbol 
ID6162159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2505267 
End bp2505704 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content65% 
IMG OID641665077 
Producttransposition helper protein 
Protein accessionYP_001791338 
Protein GI171058989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAGGT TGTTGCCACC TGAGAGTGCA TCGCTGGAAG ACGTGGCACT GGAGACAGGA 
GTTTCGTCGG CCACGTTGGA GCGCTGGCGC AGCGAAGCCC TGGGTCAGCC CGAACGTGAG
CGGGTATGGA CCGCGGCGGC GAGGTTTGAT GCCGTGCTGA CGACGGCGGC CATGGATGAA
GCCTCCAAGA GCGCATGGTG CCGCACGAAC GGCGTGTACC CCCAGGAACT TGATCAGTGG
CGGGCGTCGG CCACACAGGC GTTGGCAGCG CCCGAAGAAG CGCGGGCCAG TCCGCAGCAG
ACCAAACTCG ACCGCAAGCG CATCCAGGAG TTGGAGCGCG AACTGCGGCG CAAGGACCGG
GCCTTGGCTG AGACGGCGGC GCTGCTGGTA CTGTCAAAAA AAGTCGAGGC GATCTTCAAC
AGGGGCGAGG ACGAATGA
 
Protein sequence
MARLLPPESA SLEDVALETG VSSATLERWR SEALGQPERE RVWTAAARFD AVLTTAAMDE 
ASKSAWCRTN GVYPQELDQW RASATQALAA PEEARASPQQ TKLDRKRIQE LERELRRKDR
ALAETAALLV LSKKVEAIFN RGEDE