| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2303 |
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| Symbol | |
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| ID | 6163555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2500114 |
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| End bp | 2501724 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665073 |
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| Product | protein of unknown function DUF894 DitE |
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| Protein accession | YP_001791334 |
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| Protein GI | 171058985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAC CCGCCAAGCC GCCCCTGGTC GACCGCCTGC CGCCCACCCT GCAGGCGCTG
ACGCTGCCGG TGTTCCGGAT GTTGTGGCTG GCCTGGCTGG CCGCCAACCT GACGATGTGG
ATGAACGACG TCGCGGCCGC CTGGCTGATG ACGCAGCTCA CCGACAGCGC GGTGATGGTG
GCGCTGGTGT CGGCGGCGTC GACCCTGCCG GTGTTCCTGC TCGGCATCCC CAGCGGTGCG
CTGGCCGACA TCATCGACCG CCGGCGCTGG TTCGCCGCCA CCCAGCTGTG GGTCGCCAGC
GTGGCGGTGC TGCTGGCGCT GCTGAGCCTG GGCGACGGGC TCGATGCCCA GCTGCTGCTG
GCGCTGACCT TTGCCAACGG CATCGGCCTG GCGATGCGCT GGCCGGTGTT CGCGGCCATC
GTGCCCGACA TCGTGCCGCG CGAGCGGCTG TCGGGGGCGC TGGCGCTGCA GGCGCTGGCG
ATGAACATCT CGCGCGTGGT CGGGCCGATG TTTGCCGGCG CGCTGCTGGC GGCGTCGGGC
AGCACCGCGG TGTTCGTGTT GAACGCGCTG CTGTCGCTGG TGGCGTTTGC GCAGGTGCTG
CGCTGGAAGA GCCCGCCGCG CGTCAGCGCC TTGCCGGGCG AGCGTTTCGT CGGTGCCATG
CGGGTCGGCC TGCAGCATGT GCGGCAGAGC CCGCGCATGA AGGCGGTGCT GGTGCGGGTG
TTCCTGTTCT TCGTGCAGAG CATGGCGCTG ACCGCGCTGC TGCCGCTGGT GGCGCGCCGG
CTCGGCAGCG GGGCCGGCGG CTTCACGCTG CTGGTGTCGT CGATGGGGGT GGGCGCGGTG
GCGGCGGCGC TCACGGTGCC GCAGTTGCGC GAGAAGGTCA CGCGCGACGC CATCGCGCTG
TGGGGCACGC TGATCGTCTC GACCGCCACG CTGGCGGTGG CGTTTGCGCC GGCCTTGTGG
ATCGCCGCGC TGGCGATGGT GGTGGCCGGC GTGGCCTGGA TCAGCACCGC CAACACCATG
ACCATGTCGG CCCAGCTGGC CTTGCCCAAC TGGGTGCGGG CACGTGGCAT GTCGGTCTAT
CAGATGGCCT TGATGGGCGG CTCGGCCGGC GGCGCGGTGC TGTGGGGCCA GGTGGCCGAG
CGCGCCAGCG TGCCGGCGGC GCTGGTGACC GCCGCGGCGC TGGGCCCGCT GGTGCTGCTG
CTGACGCGGC GCCTGAGCCT GGGGGGCGGG CAGGACGAAG ACCTGAGCGC GATGCCGGCC
CACCCGGTGC CGGCGCCGGC CTTCAGCTTC GAGCCCGACC GCGGGCCGGT GATGGTGACG
GTCGAGTACC TGATCGACCC GGCCGACGGC GACGCCTTCC GCGCCGTGAT GCAGGACACC
CGGCGCGCGC GGCTGCGCCA GGGCGCGCTG TCGTGGGGGC TGTTCCGCGA CACGGCGCAG
ACCGGGCGCT ACATCGAGTA TTTCGTCGAC GAGTCCTGGG TCGAGCACCA GCGCCGCATG
GAGCGTTTCA CCGCCGCCGA CATCGGCCTG CGCGACCGCC GCCTGGCCTT CCACCGCGGC
AGCGAGATCC CGCGCGTGAC GCGCTATCTG GCCGAGGATC TCGATGTCTG A
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| Protein sequence | MNPPAKPPLV DRLPPTLQAL TLPVFRMLWL AWLAANLTMW MNDVAAAWLM TQLTDSAVMV
ALVSAASTLP VFLLGIPSGA LADIIDRRRW FAATQLWVAS VAVLLALLSL GDGLDAQLLL
ALTFANGIGL AMRWPVFAAI VPDIVPRERL SGALALQALA MNISRVVGPM FAGALLAASG
STAVFVLNAL LSLVAFAQVL RWKSPPRVSA LPGERFVGAM RVGLQHVRQS PRMKAVLVRV
FLFFVQSMAL TALLPLVARR LGSGAGGFTL LVSSMGVGAV AAALTVPQLR EKVTRDAIAL
WGTLIVSTAT LAVAFAPALW IAALAMVVAG VAWISTANTM TMSAQLALPN WVRARGMSVY
QMALMGGSAG GAVLWGQVAE RASVPAALVT AAALGPLVLL LTRRLSLGGG QDEDLSAMPA
HPVPAPAFSF EPDRGPVMVT VEYLIDPADG DAFRAVMQDT RRARLRQGAL SWGLFRDTAQ
TGRYIEYFVD ESWVEHQRRM ERFTAADIGL RDRRLAFHRG SEIPRVTRYL AEDLDV
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