| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2289 |
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| Symbol | |
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| ID | 6161977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2479258 |
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| End bp | 2480313 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641665059 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001791320 |
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| Protein GI | 171058971 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAC CGTCCCGTTC GACCCCGTTC GCAGCCATCG TTCTGGGTGC TGTCGCGCTG
TTGGGCTTCC CCTCGGCGCA CGCCCAGGAG CAGGTGCTCA ATCTCTATTC GGCTCGCCAC
TACCAGACCG ACGAGGCGCT CTACAGCAAC TTCACCAGAT CCACCGGCAT CAAGATCAAC
CGGGTCGACA CCGACGATGC CGCGCTGATC CAGCGCCTGA AGACCGAAGG CGCAGCCAGC
CCGGCCGACG TGGTCCTGAT GGTCGATGCG GCGCGACTGT GGCGTGCGGA GACCGACGGG
ATGTTCCTGC CAATCAAGTC GCGTGTGCTC GAACAACGCA TTCCGGCCAC CTTGCGCGGC
AAGGACGACG GCAACGGCTC GCAATGGTTC GGCTTCTCGA CCCGCGCGCG GGTGGTGGTC
TACAACAAGA TCAAGGTCAA GGCGCAGGAC GTCGACACCT ACGAAAAACT CGCCGATGCG
GCCAACAAGG GGCGTTTCTG TTCGCGCTCG GGTTCACACC CGTACAACCT TTCGCTGTTC
GGCGCCTACC TCGAACACGC CGGCCCGGCA AACACCGAAA ACTGGCTCAA AGGTCTGGTC
GCCAACATGG CGCGCGACCC GAAAGGCGGC GACACCGACC AGATCAAGGC CGTTGCCAGT
GGCGAATGCA GCGTTGCGCT GAGCAACACT TATTACATCG CCCGACTGAT GCGCTCGAAC
AAGCCCGATG ATCGCCAGGT CATGGAGCAG GTCGGCGTGA TCTTTCCGAA CCAGCAAAGC
TGGGGCACCC ACGTGAATGT CGCCGGTGGC GCTGTCGCCC GCCATGCCAA GAATCGCGCC
GCGGCGATCA GCTTCCTCGA ATATCTGGCC AGCGACGAGG CCCAGCGCTA TTTCGCCGAC
GGCAACAACG AATACCCGTC GGCCACCGGC GTGAAGACCG CCAACCCGGC ACTCGAAGCG
CTCGGCAGCT TCAAGCAGGA GTTGATTCCG ATATCGGTGG TCGGCCAGAA CACGGTCAAG
GTTCAGCAAA TGCTCGATCG GGTCGGCTAC AAGTAA
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| Protein sequence | MTQPSRSTPF AAIVLGAVAL LGFPSAHAQE QVLNLYSARH YQTDEALYSN FTRSTGIKIN
RVDTDDAALI QRLKTEGAAS PADVVLMVDA ARLWRAETDG MFLPIKSRVL EQRIPATLRG
KDDGNGSQWF GFSTRARVVV YNKIKVKAQD VDTYEKLADA ANKGRFCSRS GSHPYNLSLF
GAYLEHAGPA NTENWLKGLV ANMARDPKGG DTDQIKAVAS GECSVALSNT YYIARLMRSN
KPDDRQVMEQ VGVIFPNQQS WGTHVNVAGG AVARHAKNRA AAISFLEYLA SDEAQRYFAD
GNNEYPSATG VKTANPALEA LGSFKQELIP ISVVGQNTVK VQQMLDRVGY K
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