| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2216 |
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| Symbol | |
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| ID | 6160981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2418828 |
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| End bp | 2420123 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664985 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_001791247 |
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| Protein GI | 171058898 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.437046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGC TCTCCCACGA CGCCGACACC ACCGTGATCA CGCTGCCCAA CGGCGTGCGC
GTGCTCGCCA TCGCGCTGCC GCACCTGGCG AGCGTGAACG TCAGCGTGTT CGTGCGCACC
GGCAGCCACC ACGAGAGCCG GCGCCTCAAC GGCATCAGCC ACGTGGTCGA GCACATGGCG
TTCAAGGGTA CGCACGGGCG TACCTGCCAG CAGATCAACC TCGACGCCGA ACGGCTGGGC
GCCGACGTCA ACGCCCACAC CGACAAGGAC CACACCGCCT ACCACATGCG CGGCCTGGCA
CAGCATGCCG GCGTGTTCGT GCAGATGCTG GGCGACATCG TGCGCAACAG CACCTTCCCC
GAGGCCGAGC TCGAGCGCGA GCGCCAGGTC ATCCTGCACG AGTACACCGA AGATGAAGAC
GACGCACTGA CGCAGGGCTA CAAGCTGTTC GACCGCCTGT GCTTCGGCAG CCACGCCGCC
GCGCAGCCGG TGATCGGCGT GCGCGCCAAC ATCGAACGCT TCACGCGCCA GGACCTGCTC
GACTACGTGC AGCAGCGGTA CAGCGCGCCC AACGTGATCG TCGCGGTGGC CGGGCCGGTC
GACCCGCAGG CGATCGCCCG CGAGGCCGAG GCGGCGTTCG GCACGATGGC CTCGGGCCCC
GTCAACCGCG TGACGGCGCC GCACTGGGTC GGCGGCTTGC GCACCCATCG GCAGGCCGGC
TGCAGCCAGA CCCACGTGGT GCTGGGTTTT CCGGCACCGG CGCTGCGTTC GCAGCCGCAG
GCGGCGATCG TGGCTGCCGC GGTGCTCGGC GAGGGCATGA GCTCGCCGCT GCTCGACACC
CTGCGCGAGC GCCGTGGCCT GGCCTATTAC GCCGCCTGCT CGACCGACAT CACCGAGATC
GCCGGCCAGT TCATGGTCGA GGCGTCGACC TCGGCCGAAC ACCTCGACGA CTTCTTCGAC
GAGGTCGGCC AGCTGCTGCG CACCCAGGCC GAGCGCATCC AGCCGATCGA CCTGGAGCGC
GCGCGCAACC AGCTCGCCAT GCGCGGCCTG CGCAACTTCG AGCGGCCGCA GCGTCGGCTC
GAATCGGCTG CGCTGGACCT GTACGTGTTC GGCCACGTGC GCTCGCGCGC CGAGTGGCAG
GCCGGCATCG ACGCGGTCAG CGCGGATCAG GTGCGCACCG AGTTTGCGCG CCTGATCGGC
TCGCCGGTGG CGGTGGCGAT CGCCGGCAAG GTGCCGGCGC GTGCCAAGGA ACGCGCGCTC
GAACGCCTGG CGGTGCTCGG CGGCCGGCCG GCCTGA
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| Protein sequence | MNPLSHDADT TVITLPNGVR VLAIALPHLA SVNVSVFVRT GSHHESRRLN GISHVVEHMA
FKGTHGRTCQ QINLDAERLG ADVNAHTDKD HTAYHMRGLA QHAGVFVQML GDIVRNSTFP
EAELERERQV ILHEYTEDED DALTQGYKLF DRLCFGSHAA AQPVIGVRAN IERFTRQDLL
DYVQQRYSAP NVIVAVAGPV DPQAIAREAE AAFGTMASGP VNRVTAPHWV GGLRTHRQAG
CSQTHVVLGF PAPALRSQPQ AAIVAAAVLG EGMSSPLLDT LRERRGLAYY AACSTDITEI
AGQFMVEAST SAEHLDDFFD EVGQLLRTQA ERIQPIDLER ARNQLAMRGL RNFERPQRRL
ESAALDLYVF GHVRSRAEWQ AGIDAVSADQ VRTEFARLIG SPVAVAIAGK VPARAKERAL
ERLAVLGGRP A
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