| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2211 |
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| Symbol | |
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| ID | 6160976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2411512 |
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| End bp | 2413119 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664980 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001791242 |
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| Protein GI | 171058893 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.139274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTTG ATTCATCCCC CGCCTGGCTC ACGCTGCGCG GCATCCACAA ACGCTTCGGT
CCGACCCATG CCCTGAAGGG TGTGGACCTG GACCTGGTGC CCGGCCAGGT GCTGGCCGTG
ATCGGCGAAA ACGGCGCCGG CAAGTCGACC TTAGTGAAGA CGCTGACCGG CGTCTACCAA
TCTGACGAAG GCGAGATCCG CATCGAAGGC AAGCCGCAGC GCTTCCTGCG GGCGCAGGAC
GCGCAGGCCG CCGGCATCGT GGCCGTGCAC CAGGAAACGG TGATGTTCGA GGAGCTGAGC
GCCGCCGAGA ACATCTTCAT CGGTCGCCAG CCGATGCGCA GCGTCGGCCC GTTCAAGGTG
ATCGACTGGG CGCGCATGAA CCGCGAGGCG CAGGCGGTGC TCGATCAAGT GGGCGCCGGT
TTTGCCTCGA CCACGACGGT CAAGAACCTG AGCCTGGCGC AGCGCCACCT GATCGAGATC
GCGCGGGCGC TGTCGCAGAA GGCCCGCGTC GTGATCCTCG ACGAGCCCAC CGCGGCCTTG
TCGCAAGCCG AGATCCGTGA TTTCTACGGG CTGGTGCGCG GCCTCAAGGC GCAGGGCGTG
GCGGTGCTCT TCATCACCCA TAAGTTCGAC GAGATCTTTG CCGTCTGCGA CCGCTACGTG
GTGTTGCGCG ACGGCGCGTC GGTGGGCGAG GGCGCGATCG CCGATGCCGA CGAGCCGATG
CTGGTCAAGC TGATGGCCGG CCGGGCCATC GAACACATCT ATCCCGCCAT CACCAGCCAG
CCCGGCGAGG TGGTGCTGAA GGTGCAGGGC CTGAGCCACC CGAGCGAGTT CGCCGACCTC
AGCTTCGAGT TGCGGCGTGG CGAGATCCTC GGCTTCTACG GCCTGGTGGG CGCCGGCCGC
AGCGAGGCGA TGCTCGCGTT GATGGGGCTC AACCCGGCAG CGACGGGTGA AGTGACGGTC
GACGGCAAGC GCATCGAGAT CCGCCGACCC GGTGACGCGA TCGCAGCCGG CATGGCCTAT
GTGCCCGAGG AGCGCCAGCG CCAGGGCGGC ATCCTCGGCT TCTCGGTGCG GCACAACATC
AGCCTGGCGG GATTGGCGAG CGGAGCCTCG GCGCTGTCGC GTGGGCCGTG GCTGTCGCCG
CTGCGCGAGG GCGCGCTGGC CGCGAAGATG ATCGAGCGCC TGCGCATCAA GACCGCGAGC
CAGGACACGC CGATGTCGGG CCTGTCGGGC GGCAACCAGC AGAAGGTGGT GATCGCCAAG
TGGCTGGGCC TGAACCCGCG CATCGTCATC CTCGACGAGC CGACCAAGGG CATCGACGTC
GGCGCCAAGC AGGCCGTCTA TCACCTGATC GCCGAGATGG TCGAACAGGG CCTGGCGGTG
ATCCTGGTGT CGTCCGAACT GCCCGAGGTG ATGCACCTGG CGCACCGCGT GATCGTGATG
CGACGCGGCC GCATGGCCAG CGAGTTCGCG ATGGGCCAGG CCGATGCGGA AACCGTGGTG
GCCGCGGCAT CCGGCCTGGA ACTGCCACCC CGGTCGGCGG TGCCGGCACC CCTGAGCGCG
CCCGATGAGC TGCGACCCAT CACCCTGAAC CCGGAGCTGG CCGCATGA
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| Protein sequence | MRVDSSPAWL TLRGIHKRFG PTHALKGVDL DLVPGQVLAV IGENGAGKST LVKTLTGVYQ
SDEGEIRIEG KPQRFLRAQD AQAAGIVAVH QETVMFEELS AAENIFIGRQ PMRSVGPFKV
IDWARMNREA QAVLDQVGAG FASTTTVKNL SLAQRHLIEI ARALSQKARV VILDEPTAAL
SQAEIRDFYG LVRGLKAQGV AVLFITHKFD EIFAVCDRYV VLRDGASVGE GAIADADEPM
LVKLMAGRAI EHIYPAITSQ PGEVVLKVQG LSHPSEFADL SFELRRGEIL GFYGLVGAGR
SEAMLALMGL NPAATGEVTV DGKRIEIRRP GDAIAAGMAY VPEERQRQGG ILGFSVRHNI
SLAGLASGAS ALSRGPWLSP LREGALAAKM IERLRIKTAS QDTPMSGLSG GNQQKVVIAK
WLGLNPRIVI LDEPTKGIDV GAKQAVYHLI AEMVEQGLAV ILVSSELPEV MHLAHRVIVM
RRGRMASEFA MGQADAETVV AAASGLELPP RSAVPAPLSA PDELRPITLN PELAA
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