| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2203 |
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| Symbol | |
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| ID | 6160585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2403878 |
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| End bp | 2405167 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664972 |
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| Product | permease for cytosine/purines uracil thiamine allantoin |
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| Protein accession | YP_001791234 |
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| Protein GI | 171058885 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR02358] probable hydroxymethylpyrimidine transporter CytX |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.703215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA CACACACTTC GATTTCTTCT TCCCGCCCGC TCGATGCGTC GCAGCGGGTC
TTCGGCCTGC GCGACCACGC CTCGCTCTGG TTCAGCCTGG GCGTGGGCCT GCTGGTGATG
CAGGTCGGCG CCTACCTGGT GCCGGCGATG GGTACGCAGG CGGCGCTGTT CGCGATTCTG
GTCGGCTCGA TCGTCGGCGC CGGCCTGCTG GCCTGGGTGG CGCAGATCGG CTGCGAGCGC
GGCCTGTCGA GCGCGGCGCT GATCAGCCAG ACGCTGGGCA GCCGTTTCGC CCGCCTGCCG
GTGATCCTCA ACATCGTGCA GCTGCTCGGC TGGACCGCCT TCGAGCTGGT GGTGATGCGC
GACGGCAGCG CCGCGATCGT CAAGCAGCTC ACCGGCGTCG ACGCCGCCTG GGTGCCGTAT
GCCGCCACGC TGCTGCTGGG CGGCCTGCTG CTGGCGCTGG CGCGCGGCTC GATGGTCAGG
CTGGTGCGGC GTTTCGTCGG CCGCTACGGC CTGCCGCTGG TGATCGCCTC GCTGGTCTGG
CTGACGGTCC AGTTCGTGCT GGCCGCGCAG GCGCAGGGCT TCGAGGCCTT CTGGCAGCGC
CCCGGCAACG GCTCGATGAG CACCATCGCC GCGGTCGACC TGGTGATGGC GATGCCGGTG
TCGTGGCTGC CGCTGGTGGC CGACTACGCG CGCTACGGCA AGTCCGGCCT CAGTGCCCGC
CGCGGCACCT GGATCGGCTA CGCGATCGCC AACACCTGGT GCTACGCGCT GGGCGTGCTG
GTGGTCAGCA CCGCGCAGCC CGGCCTGGAC CTGGTGACGA CGCTGCTGCT GGCGCAAGGC
GGCCTGATCG CGCTGGGCCT GATCCTGATC GACGAGATGG ACAACGCCTA CGGCGACGTG
CACTCGGGCG CGGTGTCGCT GAACTTCCTG CGACCGGGCA CCAGCGTGTC GAGCTGGGGC
ATGGTGATGG CGGGGGTGTC GGTGGCGGCG GCGATGGTGC TGCCGATGCA CAGCCTCGAG
CCCTTCCTGC TGATGCTCAG CTCGGTGTTC GTGCCGCTGT TCGGCGTGGT GATCTCGCAG
CTGGCCGCAC AAGGCCGCAG CCGCGAGGTC GCGATCGCCT GGGGCCCGGC GGCGGTCTGG
CTGCTGGGCA TCGCGGTGTT CCACCTCAGC CCGAAGATCG CGCCGGCGCT GGGTTCGGCC
ATCCCCGCGC TGGTGGTGAC GCTGGCCGTG GGCAGCCTGC TGCGTTCGCG CGGCCACGAC
GGCCCGGTGC CGTCGGTCAG CGGCGCCTGA
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| Protein sequence | MADTHTSISS SRPLDASQRV FGLRDHASLW FSLGVGLLVM QVGAYLVPAM GTQAALFAIL
VGSIVGAGLL AWVAQIGCER GLSSAALISQ TLGSRFARLP VILNIVQLLG WTAFELVVMR
DGSAAIVKQL TGVDAAWVPY AATLLLGGLL LALARGSMVR LVRRFVGRYG LPLVIASLVW
LTVQFVLAAQ AQGFEAFWQR PGNGSMSTIA AVDLVMAMPV SWLPLVADYA RYGKSGLSAR
RGTWIGYAIA NTWCYALGVL VVSTAQPGLD LVTTLLLAQG GLIALGLILI DEMDNAYGDV
HSGAVSLNFL RPGTSVSSWG MVMAGVSVAA AMVLPMHSLE PFLLMLSSVF VPLFGVVISQ
LAAQGRSREV AIAWGPAAVW LLGIAVFHLS PKIAPALGSA IPALVVTLAV GSLLRSRGHD
GPVPSVSGA
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