| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2200 |
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| Symbol | |
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| ID | 6161992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2397472 |
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| End bp | 2398719 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664968 |
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| Product | integrase family protein |
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| Protein accession | YP_001791231 |
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| Protein GI | 171058882 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.158333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCG ACGCCGACTG CCGCAACGCC TCTTGCCCGC CTGATCTGAA GCGTCGGCGC
CTGTCCGATG CGGCCGGGCT GTACCTCGAG GTGTCGCCGG CCGGCTCCAA GCGCTGGTTC
TGGAAGTTCT ACCCGGACGG CAAGGAATCC CGCCTGGCGC TGGGCAGCTA TCCCGAGGTG
AGTCTGAAGG CGGCCCGCCT GGCGCGCGAC GCCGCCCGCA AGGTCAGGGC CGACGGCACG
AACCCGGTTC AGCAGCGCAA GGCCGACACG CTGGCCAAGG CCACCAGCAA CGCGACCACG
TTCGAGGCGG TGGCGCGCGA GTTCTTCGCC ACCAAGGCCG GCGCCTGGAG CGCGACCTAT
TCGGCGCGCT GGATCACGCA GATGGAGAAA GACCTGTTCC CCGTGCTCGG CTCGCTGCCG
CTGGCCGACG TTTCGGCCCC GATGCTGCTG GACGCCCTGC GCAGGGTCGA GAAGCGCGGC
GCGAACGAGA CGGCGCACAC CCTGCGCCAG ACGGCCGGGC AGGTGTTTCG CTACGGGATC
CAGACGGGCC GCTGCGAGCG CAGCCCGGCG CCTGACCTGC ACGGCGCGCT GCGCCCCGTC
GCCGTCAAGC ACATGGCCGC GGTGCTGGAG CCGATCAAGG CCGGCGAGCT GCTGCGCGCC
ATCGACAGTT ACGCCGGCCA GCCCATCACC CGCGCGGCGC TGGCGATTTC AGCCCTGGTG
TTCCAGCGCC CCGGCAACAT CCGGGCGATG GAGTGGGCCG AGGTCGACGT CGACGCGGCG
CTGTGGACGA TCCCGGCCGA CAAGATGAAG CGCACGGTGC ACGGCAAGAC GAACGGCCGG
CCGCACCTGG TCCCGCTGGC GCCCCAGGCC CTGGCGATCC TTGAAGAGCT GCGGACGCTG
ACCGGCTACG GCCAGTTCGT GTTCCCCTCG CTGCTGACCG GTGAGCGCTG CATGAGCGAG
AACACCATCC GGGCCGCCCT GCGCCGCATG GGCTACAGCA ACGACGAGAT GACCGCCCAC
GGCTTCCGGG CGATGGCGCG CACCCTGATC GTGGAGCGCC TGCCCGGCAT CAACCCGGAC
GTGATCGAGG CGCAGCTCGC GCACGGCAAG TCCGGGCCGC TGGGCATGGC CTATGACCGG
GCGGAGTTCA TGGAGCAGCG CCGGCAGATG ATGGCGGCGT GGGCGGACTA CCTCGACCGT
CTGCGCATCG GTGCGCAGGT GGTGCCGATC AAGGGGAGGG CGGCATGA
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| Protein sequence | MLTDADCRNA SCPPDLKRRR LSDAAGLYLE VSPAGSKRWF WKFYPDGKES RLALGSYPEV
SLKAARLARD AARKVRADGT NPVQQRKADT LAKATSNATT FEAVAREFFA TKAGAWSATY
SARWITQMEK DLFPVLGSLP LADVSAPMLL DALRRVEKRG ANETAHTLRQ TAGQVFRYGI
QTGRCERSPA PDLHGALRPV AVKHMAAVLE PIKAGELLRA IDSYAGQPIT RAALAISALV
FQRPGNIRAM EWAEVDVDAA LWTIPADKMK RTVHGKTNGR PHLVPLAPQA LAILEELRTL
TGYGQFVFPS LLTGERCMSE NTIRAALRRM GYSNDEMTAH GFRAMARTLI VERLPGINPD
VIEAQLAHGK SGPLGMAYDR AEFMEQRRQM MAAWADYLDR LRIGAQVVPI KGRAA
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