| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2173 |
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| Symbol | |
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| ID | 6163152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2379287 |
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| End bp | 2380279 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664941 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001791204 |
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| Protein GI | 171058855 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.133443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAG CCATCCGCAT CCACCAGACC GGCGGCCCTG AAGTGCTCAC GCTCGAAAGC
GTCGAGGTCG GCGATCCCGG CCCCGGCCAG GCGCGTGTGC GCCACAGCTT TGTGGCAGTC
AACTTCATCG ACATCTACTT CCGCACCGGC CGCTACCCGA TGCCGCTGCC GAACGGCCTG
GGCTCGGACG CCGTCGGCGT GGTCGAGGCG GTGGGCGAGG GCGTCACCGA GTTCAAGCCC
GGCGACCGCG TCGGCTACCT GCTCGGGCCG CAGGGCGCGT ACAGCGACGT GCGCCTGATA
CCGGCCGACG TGCTGATCCC GCTGCCCGAC GGCGTGTCCG ACCGCACCGC CTCGGCGCTG
ATGATGAAGG GCATGACGGC GCAGTACCTG TTCCGGCAGG TCTACCCGCT GCAGGGCGGC
GAGACCATCC TGTATCACGC CGCGGCCGGT GGTGTCGGCC TGGTGGCGTG CCAATGGGCA
CGGGCGCTCG GCGTGACCAT GATCGGCACC GTCAGCACCG AAGAAAAAGC AGCGATCGCA
CACGCCCACG GCTGTGCGCA CACCATCGTC ACCGGCGGCA CCGCGCCCGA AGCGCTCGCC
GGCCTGATCG CCAAACGTGT GCGCGAGATC ACCGACGGCA AGGGTGTGCC GGTCGTCTAC
GACTCGGTGG GCAAGGACAC CTTGATGGCT TCGCTCGACA GCCTGCAGCC GCGTGGCAGC
CTGGTCAGCA ACGGCACCTC GTCGGGGCCG GTGGTGATCG ACACCACGCT GCTGGCGGTC
AAGGGCTCGA TCTGGGTCAC GCGCCCGGCC ATGGTCCATT ACGCGACGCC GCGCAGCCAC
ATGCTGGCGA TGGCGAACGA GCTGTTCGGC CACGTGCTGG CCGGGCGCAT CCAGGGTGAG
CCGCAGCAGG TCTACGCGCT GGCCGACGCC GCCGAGGCGC ACCGCGCGCT CGAATCGCGC
GCCACCGTCG GCGCCACCGT GTTGATTCCC TGA
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| Protein sequence | MSKAIRIHQT GGPEVLTLES VEVGDPGPGQ ARVRHSFVAV NFIDIYFRTG RYPMPLPNGL
GSDAVGVVEA VGEGVTEFKP GDRVGYLLGP QGAYSDVRLI PADVLIPLPD GVSDRTASAL
MMKGMTAQYL FRQVYPLQGG ETILYHAAAG GVGLVACQWA RALGVTMIGT VSTEEKAAIA
HAHGCAHTIV TGGTAPEALA GLIAKRVREI TDGKGVPVVY DSVGKDTLMA SLDSLQPRGS
LVSNGTSSGP VVIDTTLLAV KGSIWVTRPA MVHYATPRSH MLAMANELFG HVLAGRIQGE
PQQVYALADA AEAHRALESR ATVGATVLIP
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