| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2149 |
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| Symbol | |
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| ID | 6163721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2350189 |
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| End bp | 2350779 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664917 |
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| Product | pyruvate/ketoisovalerate oxidoreductase, gamma subunit |
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| Protein accession | YP_001791180 |
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| Protein GI | 171058831 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000139467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCAGA TCCGCATCCA CGGGCGGGGT GGGCAAGGCG TGGTGACGGC GGCCGAGTTG
CTGTCGGTGG CCGCCTTCGA GCAGGACCGC CACGCGCAGG CCTTTCCGAG CTTCGGCTCC
GAACGCACCG GCGCGCCGGT GGTGGCGTTC TGCCGCATCG ACGACCGCGA GATCCGCCTG
CGCGAGCCCA TCCTCGCGCC CGACGTGCTG ATCGTGCAGG ACCCGACGCT GCTGCACCAG
GTCGACGTCT TCCAGGGCCT GCAGGCCGAC GGCTACGTGC TGATCAACAG CCGGCGCAGC
TTCGACGAAC TCGGCCTGGG CGAGATCGCC ACGCGCTTTC GCCATGAACG CCTGATCACC
GTGCCGGCCA GCGAGATCGC GCAAAAGCAC CTCGGCCGCC CGCTGCCCAA CGCCGTGCTG
CTGGGCGGTT TCGCGGCGTT GTCGGGGCTG ATCACGCTCG ACGCCGTGGC CCATGCGATC
GGCGACAAGT TCAGCGGCAA GGTGGCCGCC GCCAACGTGG CTGCCGCGTC CGAGGCCTTC
GACTACGTGC GCCATCAACT CCGGGAACTG ACCCATGCTC AAGCAGATTG A
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| Protein sequence | MLQIRIHGRG GQGVVTAAEL LSVAAFEQDR HAQAFPSFGS ERTGAPVVAF CRIDDREIRL
REPILAPDVL IVQDPTLLHQ VDVFQGLQAD GYVLINSRRS FDELGLGEIA TRFRHERLIT
VPASEIAQKH LGRPLPNAVL LGGFAALSGL ITLDAVAHAI GDKFSGKVAA ANVAAASEAF
DYVRHQLREL THAQAD
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