Gene Lcho_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2080 
Symbol 
ID6162458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2270242 
End bp2270667 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content67% 
IMG OID641664849 
ProductOsmC family protein 
Protein accessionYP_001791112 
Protein GI171058763 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1764] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID[TIGR03561] peroxiredoxin, Ohr subfamily 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.378208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTC CGACCGTGCT CTACACCGCC CACGCCACCT CGACCGGAGG ACGTGCCGGC 
ACGTCCGTCA GCAGCGACGA GCGCCTCCGT GTCACCTTGT CGGTGCCCAA GGGCCTGGGT 
GGCGACGACG GTCCGGGCAC CAACCCGGAG CAGCTGTTTG CAGCGGGTTA TTCGGCCTGT 
TTTCTGGGCG CGCTGAAGTT CGTGGCGGGC CAGAAGAAGA TCGCGATCCC GGCTGAAACC 
ACCATCACGG CGGACATCTC GATCGGCCCG ATCCCGACCG GCTTCGGCAT CCAGGCTGCG 
CTGACCATCC ACGTGCCGGG CGTCGACCGT GCCACGGTCG AGGAACTGGT GCAGGCCGCT 
CACATCGTCT GCCCCTACTC GAACGCCACG CGCGGCAACA TCGACGTCGC GCTGACGGTG 
GCCTGA
 
Protein sequence
MALPTVLYTA HATSTGGRAG TSVSSDERLR VTLSVPKGLG GDDGPGTNPE QLFAAGYSAC 
FLGALKFVAG QKKIAIPAET TITADISIGP IPTGFGIQAA LTIHVPGVDR ATVEELVQAA 
HIVCPYSNAT RGNIDVALTV A