Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2065 |
Symbol | |
ID | 6162829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2245049 |
End bp | 2245492 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641664834 |
Product | thioesterase superfamily protein |
Protein accession | YP_001791097 |
Protein GI | 171058748 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0110405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGTTCG AGATTCCTGC CGACAAACAC CTCGTCCACG AGATGACGTT GCCGATCCGC TGGGGTGACA TGGACGCGAT GGGCCATGTC AACAACACGG TCTACTTCCG CTACCTCGAG ATCGCCCGGC TCGACTGGCT GGGGCGCATC GCCGCCTTGC CCAACCCGCT GGGCGAGGGC CCGGTGATCG TCAACGCCTT CTGCAACTTC CACCTCCAGT TGAGCTTTCC GGGCGACGTG CTGGCGCGCA GCTACGTGCG CAACCCCGGG CGCAGCAGCT TCGACTTCTA CACCACGCTG GAGCGGGTCG ACGAACCCGG CGTGATCTAC GCCGCCGGCG GCGCCAAGAC GGTCTGGATC GACGGGCCGC GGCAGAAGTC GATCGCCATG CCCGACTGGC TGCGCGCGCA CCTCCTGGCC GGCACGGCCC CCGATGCAGC CTGA
|
Protein sequence | MRFEIPADKH LVHEMTLPIR WGDMDAMGHV NNTVYFRYLE IARLDWLGRI AALPNPLGEG PVIVNAFCNF HLQLSFPGDV LARSYVRNPG RSSFDFYTTL ERVDEPGVIY AAGGAKTVWI DGPRQKSIAM PDWLRAHLLA GTAPDAA
|
| |