Gene Lcho_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2065 
Symbol 
ID6162829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2245049 
End bp2245492 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content67% 
IMG OID641664834 
Productthioesterase superfamily protein 
Protein accessionYP_001791097 
Protein GI171058748 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0110405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTCG AGATTCCTGC CGACAAACAC CTCGTCCACG AGATGACGTT GCCGATCCGC 
TGGGGTGACA TGGACGCGAT GGGCCATGTC AACAACACGG TCTACTTCCG CTACCTCGAG
ATCGCCCGGC TCGACTGGCT GGGGCGCATC GCCGCCTTGC CCAACCCGCT GGGCGAGGGC
CCGGTGATCG TCAACGCCTT CTGCAACTTC CACCTCCAGT TGAGCTTTCC GGGCGACGTG
CTGGCGCGCA GCTACGTGCG CAACCCCGGG CGCAGCAGCT TCGACTTCTA CACCACGCTG
GAGCGGGTCG ACGAACCCGG CGTGATCTAC GCCGCCGGCG GCGCCAAGAC GGTCTGGATC
GACGGGCCGC GGCAGAAGTC GATCGCCATG CCCGACTGGC TGCGCGCGCA CCTCCTGGCC
GGCACGGCCC CCGATGCAGC CTGA
 
Protein sequence
MRFEIPADKH LVHEMTLPIR WGDMDAMGHV NNTVYFRYLE IARLDWLGRI AALPNPLGEG 
PVIVNAFCNF HLQLSFPGDV LARSYVRNPG RSSFDFYTTL ERVDEPGVIY AAGGAKTVWI
DGPRQKSIAM PDWLRAHLLA GTAPDAA