| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2053 |
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| Symbol | |
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| ID | 6160589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2231094 |
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| End bp | 2232533 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664822 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791085 |
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| Protein GI | 171058736 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000533469 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCTCGC TGTCCTCGAT GTTGCTGATC GTTCTCGCCG TGCTCGGCGG GCTGAACCTG
TTTGTGCTGG TTCAGCTGCT GCGCCAGACC GGCTCGGACC AGGATCCCGA CAGCCAATGG
CAGTGGCTGC AGACCACCTT GACGGCGCTG CAGCGCGATC AGCACAGTGG CGCCGAGCGC
ACCGAGCGTG AACTGCGCGG CGCCGTGCTG GCCGCCGCGC GCGACACCCG GGTCGAACTC
GGTGGCGGGC TGGCCGAGTT CCAGCGGCTG CTGATGGCGC AATCGGGCGA GGTGGCGCGC
ACGCAGAACG AGCAGATCGA CTCGTTTCGC ATCCAGCTGG CCGCGATGCA GACCGGCCTC
GACCAGCGCC TGGCCGGCCT GCAGGGGGGC ATCGAGCAGC GGCTGGTGTC GATGCAGGGC
AGCGTCGAGC AGCGCTTGAG CAATCTGCAG GGCGGTGTCG AGCAGCGCCT GGCCAGCCTG
CAGGCCGACA ACGAGAAGAA GCTCGACCAG ATGCGCGCCA CGGTCGACGA GAAGCTGCAC
GCCACGCTGG AGGCGCGGCT GGGCGAGAGC TTCAAGCAGG TCGCCGAGCG GCTCGAGCAG
GTGCACCGCG GCCTGGGTGA GATGCAGACG CTGGCGCAGG GCGTGGGCGA CCTCAAGCGC
GTGCTGACCA ACGTGAAGGC GCGCGGCGTG TTCGGCGAGG TGCAGCTCGC CGGCCTGCTG
GAGCAGGTGC TGACGCACGA GCAGTACGCC GTCAACGTGG CCACCGTGCC GGGCAGCAAC
GAGCGGGTGG AGTTCGCGAT CCGCCTGCCC GGCCGCGCGG TGGGCGGGGC GCCGGATGCG
CCGGTCTGGC TGCCGATCGA CGCCAAATTC CCGCGCGAGG ACTACGAACG TTTGCTCGAC
GCCCACGACC GCGCCGACCG CGAGGCGGCC GAGGCAGCGG CCAAGGCGCT CGAGCAGCGC
ATCCGCGACG AGGCCCGCAG CATCGCCGCC AAATACCTGG CGCCGCCGCA CACCACCGAT
TTCGCGATCC TGTTCCTGCC CACCGAGGGC CTGTACGCCG AGCTGCTGCG CCGCCCCGGT
CTGACCGAGG CGCTGCAGCG CCAGCACCGC GTCACGCTGG CCGGGCCGAC CACGCTGCTG
GCGATGCTCA ACAGCCTGCA GATGGGCTTT CGCACGCTGG CGCTGGAGCA GCGCAGCTCG
GAGGTCTGGA GCGTGCTGGG CGCCGTCAAG ACCGAGTTCG CCAAGTTCGG CGACGTGCTG
GCCAAGACCA AGAAGAAGCT GCTCGAGGCG CACAACACCA TCGACGACGC CGAGGTGCGC
GCGCGCTCGA TGGCGCGCAA GCTCAAGTCG GTGGAGGCGC TGCCCGAGCC CGAGGCGCGC
GCGCTGTTGC CGGTCGAGTC CGGCGTGGCG CGGGATGGCG ACGCGGCAAC GGCCGGCTGA
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| Protein sequence | MPSLSSMLLI VLAVLGGLNL FVLVQLLRQT GSDQDPDSQW QWLQTTLTAL QRDQHSGAER
TERELRGAVL AAARDTRVEL GGGLAEFQRL LMAQSGEVAR TQNEQIDSFR IQLAAMQTGL
DQRLAGLQGG IEQRLVSMQG SVEQRLSNLQ GGVEQRLASL QADNEKKLDQ MRATVDEKLH
ATLEARLGES FKQVAERLEQ VHRGLGEMQT LAQGVGDLKR VLTNVKARGV FGEVQLAGLL
EQVLTHEQYA VNVATVPGSN ERVEFAIRLP GRAVGGAPDA PVWLPIDAKF PREDYERLLD
AHDRADREAA EAAAKALEQR IRDEARSIAA KYLAPPHTTD FAILFLPTEG LYAELLRRPG
LTEALQRQHR VTLAGPTTLL AMLNSLQMGF RTLALEQRSS EVWSVLGAVK TEFAKFGDVL
AKTKKKLLEA HNTIDDAEVR ARSMARKLKS VEALPEPEAR ALLPVESGVA RDGDAATAG
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